Pairwise Alignments

Query, 633 a.a., peptidoglycan DD-transpeptidase MrdA from Escherichia coli Nissle 1917

Subject, 800 a.a., penicillin-binding protein 2 from Ralstonia sp. UNC404CL21Col

 Score =  468 bits (1203), Expect = e-136
 Identities = 256/639 (40%), Positives = 379/639 (59%), Gaps = 25/639 (3%)

Query: 8   RDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPS 67
           R+   E + F  R   A L +L+  G+L+A  + LQ V+   Y  ++ +NRI + PI P+
Sbjct: 5   RNVEQELSRFRLRLAAAALFVLVCFGLLLARFFWLQQVKHEQYSAKAEDNRISVAPIEPN 64

Query: 68  RGIIYDRNGIPLALNRTIYQIEMMPEKV-DNVQQTLDALRSVVDLTDDDIAAFRKERARS 126
           RGII DRNG+ LA N + Y +E+ P K+ D +  T+D L  VVD+   D   F++    +
Sbjct: 65  RGIIMDRNGVVLARNYSAYTLEITPSKLQDTLDNTIDQLAQVVDIQPRDRRRFKRLMEDA 124

Query: 127 HRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKD 186
             F S+P+++ LT+ +VARF+  ++RFPGV+V     R YP G + +HVIGY+ +I+++D
Sbjct: 125 RSFESLPIRSQLTDQEVARFSAQRFRFPGVDVHARLFRQYPLGDSASHVIGYIGRISERD 184

Query: 187 VERLNNDGKLA--------------NYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNR 232
           ++R++N                   NY+ T  IGK+GIE+ YE  LHG TGYEEVEV+  
Sbjct: 185 LDRIDNMSDANSQPGVAYDPRKDSNNYSGTEYIGKVGIEQSYETELHGLTGYEEVEVSAG 244

Query: 233 GRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSY 292
           GR IR L       G+++ L+LD+ LQ+  E L    R A+V  +P TG +LA VS P++
Sbjct: 245 GRPIRTLSTSQATPGNNLILSLDINLQRLAEQLFGNRRGALVAIEPETGDILAFVSKPTF 304

Query: 293 DPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTL 352
           DPNLF++GI S  ++ L N P+ PL+NR  +G YPP ST KP++A+ AL  G  T    +
Sbjct: 305 DPNLFIEGIDSATWNELNNSPDKPLLNRPLRGTYPPGSTYKPFMALGALELGKRTPQWGM 364

Query: 353 FDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFG 412
            DPG + L      +RD    GHG +++ RS+  S DT++Y++A DMG++ + ++M  FG
Sbjct: 365 ADPGSFTL--GNHTFRDDVPGGHGWVDMYRSIVASCDTYYYRLANDMGVNAIHDFMKPFG 422

Query: 413 YGHYTGIDLAEERSGNMPTREWKQKRFKKP----WYQGDTIPVGIGQGYWTATPIQMSKA 468
           +G  TGID+  ER+G +P+ EWK+K +K+P    WY G+TI +GIGQGY   T +Q++ A
Sbjct: 423 FGQVTGIDIEGERTGILPSTEWKRKAYKRPEQQKWYDGETISLGIGQGYNNFTILQLAHA 482

Query: 469 LMILINDGIVKVPHLLMSTAED-GKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPN 527
           +  L N+G+V  PHL+ +  +   K      P E     +     ++ K  M GV     
Sbjct: 483 ISTLANNGVVMKPHLVKAVEDSLSKSRSLTVPTESYRIPLKQANIDVIKRAMVGV--NQA 540

Query: 528 GTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAV 587
           GTA K F  A Y  A K+GTAQV+ L  NE YN H I E  RDH L  AFAP ++P++A+
Sbjct: 541 GTAAKAFIGAQYVSAGKTGTAQVYSLGKNEKYNHHAIPENKRDHALFEAFAPADHPKIAL 600

Query: 588 AMILENGGAGPA-VGTLMRQILDHIMLGDNNTDLPAENP 625
           A+I+EN G G A    + R ++D+ + G    +L A  P
Sbjct: 601 ALIVENAGFGAASAAPIARAVMDYYLTGKWPAELAATAP 639