Pairwise Alignments

Query, 370 a.a., peptidoglycan glycosyltransferase MrdB from Escherichia coli Nissle 1917

Subject, 379 a.a., rod shape-determining protein RodA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  294 bits (753), Expect = 2e-84
 Identities = 161/363 (44%), Positives = 239/363 (65%), Gaps = 17/363 (4%)

Query: 14  VHLDPTMLLILLALLVYSALVIWSASGQDIG-MMERKIGQITMGLVIMVVMAQIPPRVYE 72
           +HL+  ++L+++A+  +  L+++S +G  +   +E ++ +  +GL IM V+A  P  V+ 
Sbjct: 19  LHLNWGLILLIVAVASFGFLMLYSVAGGSMTPWVEPQMKRFALGLAIMFVVAFTPIYVWR 78

Query: 73  GWAPYLYIICIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAVPLMVARFINRDV 132
             +   YI+ ++LL+AV+ FG +  GAQRW+DLG +R QPSE+ KI + +++A +   DV
Sbjct: 79  NLSVLAYIVSLVLLLAVEFFGVVGMGAQRWIDLGFMRLQPSELMKITLIMLLAAYY--DV 136

Query: 133 CPPSLKNTA------IALVLIFMPTLLVAAQPDLGTSILVALSGLFVLFLSGLSWRLIGV 186
               LK T+      + ++LI +P  LV  QPDLGTSIL+   G  V+F++G+ W    V
Sbjct: 137 L--DLKKTSHPFWVLVPVLLIMIPVALVLRQPDLGTSILLMAGGGVVMFVAGVHWLYFAV 194

Query: 187 AVV----LVAAFIPILW--FFLMHDYQRQRVMMLLDPESDPLGAGYHIIQSKIAIGSGGL 240
            ++    LVAA +      + L+ DYQ +R+   L+PE+DPLGAGYHI QSKIA+GSGG+
Sbjct: 195 VILGGIALVAAVLMSRGTDWQLLQDYQYRRIDTFLNPENDPLGAGYHITQSKIALGSGGV 254

Query: 241 RGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYILLIMRGLWIAARAQT 300
            GKG++ GTQS+L FLPE+HTDFIF  LAEE G +G + LLALY L+++  L  A R + 
Sbjct: 255 TGKGFMEGTQSRLNFLPEKHTDFIFTTLAEEFGFIGGISLLALYGLIVLFCLVSAMRTKD 314

Query: 301 TFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIH 360
            F  ++  G+    F +  VN+ MV G+ PVVGVPLPLVS+GGSA++VL+ GFG+V S H
Sbjct: 315 RFSSLLIIGVAATFFFFFSVNMAMVMGLAPVVGVPLPLVSFGGSAMLVLLVGFGLVQSAH 374

Query: 361 THR 363
            HR
Sbjct: 375 VHR 377