Pairwise Alignments

Query, 491 a.a., UDP-N-acetylmuramate--L-alanine ligase from Escherichia coli Nissle 1917

Subject, 488 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  643 bits (1658), Expect = 0.0
 Identities = 313/478 (65%), Positives = 385/478 (80%), Gaps = 5/478 (1%)

Query: 3   TQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMN 62
           T++  +LRS++PEMRR++ IHFVGIGGAGMGGIAEVL NEGY +SGSD+A N VT +L  
Sbjct: 4   TERYLQLRSMIPEMRRIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCL 63

Query: 63  LGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGI 122
           LGA I+  H  +NV+ A VVVVS+AI+  NPEI+AA E RIP++RRAEMLAELMR+RHG+
Sbjct: 64  LGAKIHIGHGADNVQQADVVVVSTAINPQNPEIIAAKELRIPIVRRAEMLAELMRYRHGV 123

Query: 123 AIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASF 182
           AIAGTHGKTTTT++++S+Y +AG DPTFV GGL+ +AG +ARLG  RYLIAEADESDASF
Sbjct: 124 AIAGTHGKTTTTSLIASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASF 183

Query: 183 LHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPR 242
           LHLQPMV++VTNIEADHMDTY GDFE LK TF++FLHNLPFYG AV+C+DDPV+RE++PR
Sbjct: 184 LHLQPMVSVVTNIEADHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDPVVREIMPR 243

Query: 243 VGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVA 302
           + R   TYGF +DADV+  ++ Q G Q  FT+ R+ KE + + LN PG+HN LNA AA+A
Sbjct: 244 ISRHIVTYGFRDDADVQALNFSQQGHQCRFTVRRKGKEDLDLLLNLPGQHNVLNALAAIA 303

Query: 303 VATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDAT 362
           VATE+ IDD AI++AL  FQG GRRF  LG+F         G  MLVDDYGHHP+EV AT
Sbjct: 304 VATEDEIDDSAIIQALAEFQGIGRRFQHLGKFAT-----PKGEVMLVDDYGHHPSEVAAT 358

Query: 363 IKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADS 422
           IKAARAGWP+K LVM +QPHR+TRTRDLY+DF  VL+QVD LL+L+VY AGEAPIPGAD 
Sbjct: 359 IKAARAGWPEKRLVMAYQPHRYTRTRDLYEDFIEVLSQVDCLLLLDVYSAGEAPIPGADG 418

Query: 423 RSLCRTIRGRGKIDPILVPDPAQVAEMLAPVLTGNDLILVQGAGNIGKIARSLAEIKL 480
           R+LCR+IR RG++DPI +  P Q+AE+L  VL   DL+L QGAGNIG ++R LA  +L
Sbjct: 419 RALCRSIRLRGQLDPIFIASPEQLAEVLPDVLQEGDLLLTQGAGNIGALSRKLAASEL 476