Pairwise Alignments

Query, 491 a.a., UDP-N-acetylmuramate--L-alanine ligase from Escherichia coli Nissle 1917

Subject, 470 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  364 bits (935), Expect = e-105
 Identities = 196/457 (42%), Positives = 271/457 (59%), Gaps = 14/457 (3%)

Query: 22  IHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASV 81
           IHF GIGG GM GIAEVL   GY + GSDL P+ +T++L  LGA I+     EN+ DA V
Sbjct: 20  IHFTGIGGIGMSGIAEVLLTHGYTVQGSDLKPSKITERLERLGAKIFIGQVGENLADAEV 79

Query: 82  VVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIY 141
           VV+SSAI   NPE+  A    +PV+RRAEMLAELMR +  IAIAGTHGKTTTT MV+++ 
Sbjct: 80  VVISSAIKPGNPELETARARGLPVVRRAEMLAELMRLKSNIAIAGTHGKTTTTTMVATLL 139

Query: 142 AEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMD 201
              G+DPT +NGG++ A   +AR G G +++ EADESD +F  L   +A+VTNI+ +HM+
Sbjct: 140 DRGGIDPTVINGGIIHAYDSNARAGAGEWMVVEADESDGTFNRLPATIAVVTNIDPEHME 199

Query: 202 TYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRV-GRQTTTYGFSEDADVRV 260
            + G FE LK  F  F+ N+PFYG AV C D P ++ L+ R+  R+  T+GF+  ADVR 
Sbjct: 200 -HWGSFERLKDGFHEFVSNIPFYGLAVCCTDHPEVQALVGRITDRRVVTFGFNTQADVRA 258

Query: 261 EDYQQIGPQGHFTLLRQDKEPM--RVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRAL 318
            +        HF +L +++  +    TL  PG HN  NA AAVAVA   G+  + I  AL
Sbjct: 259 VNLTYKSGVAHFDILLRNEGQVISGCTLPMPGDHNVSNALAAVAVARHLGMKRDEIRAAL 318

Query: 319 ESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVML 378
             F G  RRF  + E          G   ++DDYGHHP E+ A +KAAR    +  ++ +
Sbjct: 319 AGFAGVNRRFTKVAEL---------GGVTIIDDYGHHPVEIAAVLKAARQA-SEGRVIAV 368

Query: 379 FQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPI 438
            QPHRF+R   L++DF     + D + + +++ AGE PIPGA    L + +   G    +
Sbjct: 369 HQPHRFSRLASLFEDFCTCFNEADVVGISDIFAAGEDPIPGASRDDLVKGLIAHGHRHAV 428

Query: 439 LVPDPAQVAEMLAPVLTGNDLILVQGAGNIGKIARSL 475
            VPD   +  ++       D+++  GAG I   A +L
Sbjct: 429 AVPDEDALEALIRAEAKPGDIVVCLGAGTISTWAHNL 465