Pairwise Alignments

Query, 464 a.a., flagellar filament capping protein FliD from Dyella japonica UNC79MFTsu3.2

Subject, 577 a.a., flagellar hook-associated 2 domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  105 bits (261), Expect = 5e-27
 Identities = 108/437 (24%), Positives = 192/437 (43%), Gaps = 71/437 (16%)

Query: 14  GTLTAAGVGSGLDVNGLVSQLVAAKKKPLQDQIDSQTSTAKTQISALGQVSSALAALQTA 73
           G +  +G+G+G D + ++ QL + ++ P Q ++    +  + +  A G++ + +A+L+  
Sbjct: 7   GGVYFSGLGNGTDFSKVIDQLKSIEQIP-QKRLTLWKADWQRRQDAFGELRTEIASLKDI 65

Query: 74  LKGLSDGTAFQTRKAATSDASVFSVSSTTGAMNGSYNINVSQLATALKVQSAGVASSDAK 133
           +  +S    F  +  ++S  +V S ++ +  + G+Y I V QLA++  + +   A +D K
Sbjct: 66  VDSMSTMNKFLVKTGSSSAETVASATTDSSVLEGNYKIEVGQLASS-SIWTYNTAFADKK 124

Query: 134 VGTGT------LTIAVGSKSMSVDIGSDGSSLSQIRDAINKGSGNPGVTATIVTGSDGAH 187
                             K+ S+ + S G+++  +++ IN    NPGV A +V    G  
Sbjct: 125 TKVNDSGSDQQFVYTYMGKTRSITVPS-GTTIDALKNMINNDPQNPGVKAMLVQNGTG-- 181

Query: 188 LVLSSTATGQANAFTVSSSGGD-GGLAALNYDPASSSNGLS------VVNAAQDAKFTID 240
                        +T    G D G  A L+ D  ++  GL        V A+Q+AK+ ++
Sbjct: 182 -------------YTFQFRGMDLGANATLSVDSGTTVTGLPGTAATWTVQASQNAKYRVN 228

Query: 241 GMAAT----SASNTVTGAIDGVTLSLWKQGTATLSVSTDSSAASTAVGNLVTAYNNFVGT 296
           G  A     SASNT+TGA++G+TL+L   GT  +SV+TD+      V + V A N     
Sbjct: 229 GWPAATWLESASNTLTGAVEGMTLTLKDVGTTQISVATDTEKIKENVKSFVDAMNAVRSK 288

Query: 297 YQSLTAYDPS-------------GTNTGALI-GDATLNSIKSTLSSIVSG---------- 332
            + LTA + S                 G+++ G+  +  + + L    +           
Sbjct: 289 IKELTAVNSSKDVDNPDDASSLYSMQKGSILTGNYGVQLLSTQLKMATADRAAGFEYQYK 348

Query: 333 -----AGGNGAMLNSIGITLQVD------GTLKLDTGALSTALSDGGTKVSGLFAGDNGM 381
                 G   + L  IGI    +      G L+LD   L   L +  T V+ LFA D G+
Sbjct: 349 DGNLLRGDEFSSLAHIGILTNAETNSLNAGLLELDEAKLDEVLKNNPTAVAELFAAD-GL 407

Query: 382 ATRLSSPLTDWTASTGV 398
               SS  + ++   GV
Sbjct: 408 PESDSSDFSYYSHVKGV 424



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 29/201 (14%)

Query: 261 SLWKQGTATLSVSTDSSAASTAVGNLVTAYNNFVGTYQSLTAYDPSGTNTGALIGDATLN 320
           S+W   TA     T  + + +    + T    ++G  +S+T   PSGT         T++
Sbjct: 112 SIWTYNTAFADKKTKVNDSGSDQQFVYT----YMGKTRSITV--PSGT---------TID 156

Query: 321 SIKSTLSSIVSGAGGNGAML-NSIGITLQVDGTLKLDTGALSTALSDGGTKVSGL----- 374
           ++K+ +++     G    ++ N  G T Q  G   +D GA +T   D GT V+GL     
Sbjct: 157 ALKNMINNDPQNPGVKAMLVQNGTGYTFQFRG---MDLGANATLSVDSGTTVTGLPGTAA 213

Query: 375 ----FAGDNGMATRLSSPLTDWTAS-TGVLTTRTNNLNKQLKDLGTRQDNLNADMDALTT 429
                A  N        P   W  S +  LT     +   LKD+GT Q ++  D + +  
Sbjct: 214 TWTVQASQNAKYRVNGWPAATWLESASNTLTGAVEGMTLTLKDVGTTQISVATDTEKIKE 273

Query: 430 QYTKRFTALDTLLTKLNSTSS 450
                  A++ + +K+   ++
Sbjct: 274 NVKSFVDAMNAVRSKIKELTA 294