Pairwise Alignments

Query, 246 a.a., flagellar basal-body rod protein FlgF from Dyella japonica UNC79MFTsu3.2

Subject, 242 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score =  149 bits (376), Expect = 5e-41
 Identities = 88/244 (36%), Positives = 139/244 (56%), Gaps = 4/244 (1%)

Query: 1   MDRSIYVAMTGATQMMRAQTEVAHNLANADTVGFKAQMSAFKPLPVQGQGLGSRINGVAQ 60
           MDR  Y AMT A++ M +    ++NLAN +T GF+A +   + + V+G G  SR   + +
Sbjct: 1   MDRLGYTAMTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAVAVEGYGYDSRHMALIE 60

Query: 61  GIGWDMHAGAQMDTGRPLDVAVQGDGWMAVQSADGGEGYTRAGQLQLTADGLLTDARGNP 120
             G  + AG  + TGR LD AV+G G + +Q  + GE YTR G +Q+ A+G LT   G  
Sbjct: 61  NNGVSLAAGPMVATGRELDFAVKGTGLIVLQDGE-GEAYTRQGSMQVDAEGRLT-LNGRA 118

Query: 121 VLGDGGPITVPDATQVSIGADGTISVVPKGQGPDTSSVIGKLKLVKPASDQLQLGDDGLM 180
           VLG+GGPI +P+  ++ IG DGT+SV+  G      + + +++LV   +  L     GL+
Sbjct: 119 VLGEGGPIVLPEYDRMEIGNDGTVSVMAPGDW--MMAEVDRIRLVDVPAANLMKNQAGLL 176

Query: 181 HLAGGGVAPADETVTVKAGALESSNVNPSQTLVQMIQLSRQYELQVRAIRTADDNAQSAT 240
               G  A   E V + +G LESSNV+    L   + L+R +E QV+ ++ A+D + +  
Sbjct: 177 VTRDGEPAQPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDLSDAGN 236

Query: 241 RLLQ 244
           R+++
Sbjct: 237 RMIR 240