Pairwise Alignments

Query, 284 a.a., LysR substrate-binding domain-containing protein from Dyella japonica UNC79MFTsu3.2

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (468), Expect = 2e-51
 Identities = 113/288 (39%), Positives = 157/288 (54%), Gaps = 8/288 (2%)

Query: 1   MRYTLPPMHTLRAFEAAARLRNFTLAGEELHLTASAVSHQIRALEAFYGTALFRRQRHEV 60
           M   LPP++ ++AFEAAAR  +FT A EEL +T +AVSHQI+ALE + G  LFRR+   +
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEYLGLKLFRRKNRSL 60

Query: 61  ALTSAGERLLDAAQPLLERLSALGDALRARDA-QRLSLTAPPSLVSRWLMPRLGAFLAAH 119
            LT  G+      + +  +L+   D L AR A   L+++  PS   +WL+PRL  F   +
Sbjct: 61  LLTEEGQGYFLDIKDIFVQLADATDRLLARSAIGSLTVSTSPSFAIQWLVPRLANFSENN 120

Query: 120 PQVDFRLHATTALLDLDAEQADLAIRYGDGRWPGLHAEKLFDESIFPVAAPAYARMLKLV 179
           P +D R+ A         +  D+AI YG G WPGL A+KL +E + PV +P      K +
Sbjct: 121 PDIDVRIKAVDDETSSLTDDVDVAIYYGMGNWPGLRADKLRNEVLIPVCSPMLLSGPKPL 180

Query: 180 G--DDFHAATLLRDDF-HSWERWPGAAGATP----SGPVYSDSALLLQAAEAGHGVALGR 232
               D    TLL D   H W+ W    G        GP++S S+L+LQAA  G GVALG 
Sbjct: 181 SQPSDLKHHTLLHDSSRHDWQAWFRQCGINDINVNQGPIFSHSSLVLQAAAHGQGVALGY 240

Query: 233 SVLVADAIRSGALVRLGTRAIAVPGAYYLVSARDVADTPAVAAFRAWL 280
           SVL    I++G LV      +    AYYLV  ++ A+   + AFR W+
Sbjct: 241 SVLARPDIKAGRLVCPFPEVLVSKNAYYLVCQQNHAEIGKIVAFRKWM 288