Pairwise Alignments

Query, 321 a.a., helix-turn-helix domain-containing protein from Dyella japonica UNC79MFTsu3.2

Subject, 329 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 90/315 (28%), Positives = 142/315 (45%), Gaps = 22/315 (6%)

Query: 3   IAVLAVDGVFDTGLATMLDTLATANELAVMQKMP---SPRFDFRVVGVR-KTVRTSLGLR 58
           +++LA +GVF + L    D    A+ L   +++    +P F+ R+V    + V T  G  
Sbjct: 10  VSILATEGVFASTLMQAKDFFHMAS-LRYGRQIGLDLTPAFETRLVSPDGQPVNTFSGTG 68

Query: 59  VPVQEAASVRRPDWVMVPAPGTKMPEPLLLALAKRESQDAMEQLRRWHRGGARIGAACIG 118
           + V     +   D V++PA           AL  +  + A   LR  H  G+ I     G
Sbjct: 69  IAVD--GLLDEADMVILPAFWGDFD-----ALCAQYPEVA-PWLRERHAAGSVICGEATG 120

Query: 119 SFLLAESGLLDGHDATTTWWLGPLFRRRYPNVALDENRILVPAGDFVTAGAAMGHLELAL 178
            F +A++GLL+G +ATT W     F  R+P VA   ++ L  + +   AG      +L +
Sbjct: 121 VFWMAQAGLLEGREATTHWRFANDFAARFPGVAFSADKHLTDSDNLYCAGGTTSACDLYM 180

Query: 179 WLVRQVSPA-LADMTARYLLVDTRTSQAPYMI-----PVHLAQADPVVQSFERWARERLH 232
           +LV +   A +A   AR +L + + S +P  +      +HL   D  +   + W      
Sbjct: 181 YLVERFCGAHVAQGMARDVLFELQRSYSPGRLGFGGQKLHL---DTRILQIQEWLEANFA 237

Query: 233 EGFSLEAAAEAMNTSKRSLQRRMESVLGKSPLAYFQDLRVERAVHLLRTSHQDVEAIATE 292
           E F  E  A     S R+  RR  +  G  PL Y Q LR+E A  LL T+ + ++ I+ E
Sbjct: 238 EKFRFEDVARQHGMSIRNFMRRFHAATGDKPLHYLQRLRIETAKSLLATTGKSIKTISYE 297

Query: 293 VGYADGVTLRTLLRK 307
           VGY D      L R+
Sbjct: 298 VGYDDASFFARLFRQ 312