Pairwise Alignments

Query, 321 a.a., helix-turn-helix domain-containing protein from Dyella japonica UNC79MFTsu3.2

Subject, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score =  142 bits (357), Expect = 1e-38
 Identities = 103/324 (31%), Positives = 154/324 (47%), Gaps = 17/324 (5%)

Query: 1   MKIAVLAVDGVFDTGLATMLDTLATANELAVMQ---KMPSPRFDFRVVGVRKTVRTSLGL 57
           ++I +L   G     +  + D  + AN +A  +   K+P+     RV        TS   
Sbjct: 8   LEIGLLLYPGAQLAAVYGLTDLFSVANRMAAERGAAKLPT----LRVTHWSLQDGTSGIQ 63

Query: 58  RVPVQEAASVRRPDWVMVPAPGTKMPEPLLLALAKRESQDAMEQLRRWHRGGARIGAACI 117
           RV      S R P  +++P      PE  ++       Q     L + H+ G  +G+ C 
Sbjct: 64  RVFDSLPGSQRSPRIIILPPCLEARPEAHVI-------QPFAAWLGQCHQAGVTLGSVCA 116

Query: 118 GSFLLAESGLLDGHDATTTWWLGPLFRRRYPNVALDENRILVPAGDFVTAGAAMGHLELA 177
           G+FLLAE+GLLDG   TT W L    R R+PNV +D +R++V  GD +TAG  M   +L 
Sbjct: 117 GAFLLAETGLLDGRTVTTHWGLAQALRERFPNVQVDADRMIVDDGDIITAGGLMAWTDLG 176

Query: 178 LWLV-RQVSPALADMTARYLLVD-TRTSQAPY-MIPVHLAQADPVVQSFERWARERLHEG 234
           L LV R + P +A  TARYL++D TR SQ  +      L   D  V   +RW + +    
Sbjct: 177 LALVERLLGPTIASETARYLVIDLTRQSQRYFSSFAPRLDHGDEAVLRVQRWLQSQSASA 236

Query: 235 FSLEAAAEAMNTSKRSLQRRMESVLGKSPLAYFQDLRVERAVHLLRTSHQDVEAIATEVG 294
             + A A      +R+  RR  +  G  P  Y Q LRV +A  LL  +++ +E +A  VG
Sbjct: 237 VPVAAMAAQAGMGERTFLRRFRAATGLKPTEYCQQLRVGKARELLELTNRGIEQVAWAVG 296

Query: 295 YADGVTLRTLLRKRLGCGVKELRR 318
           Y D    R + ++ +G    + RR
Sbjct: 297 YQDPGAFRKVFQRLVGLSPGDYRR 320