Pairwise Alignments

Query, 186 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

Subject, 175 a.a., RNA polymerase ECF-type sigma factor from Caulobacter crescentus NA1000

 Score = 78.2 bits (191), Expect = 8e-20
 Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 14/159 (8%)

Query: 16  GNAPRFESFVRDQRHALLAFLRRRVSSEEDAQDIAQESLVRLIRYREHAP-ESWSSLLYR 74
           G  P  ++++R     L A L RR    +DA DIAQ++ +R+  YR   P  S  SLL R
Sbjct: 22  GTPPLADAYLR-HLDWLTALLARRYP--QDADDIAQDTWLRVHDYRPPRPVRSPRSLLAR 78

Query: 75  IAINALNDRARRAQSHYQHDHISLDEHAHGLVSNDQDHDQRIANQQELARLQQALLGLPA 134
           IA+N    R R++      D     +HA  L     D     A+Q++    +Q +L LP 
Sbjct: 79  IALNLAASRFRKSSREIPTD----PDHAP-LAGRVID-----ASQEQAVLFEQMMLALPP 128

Query: 135 RCREIYLLNRIEGMSYPEIARHCGISVKAVEKNISRALA 173
           + R++++LN + G++Y EIA+  GISVKAVEK +++A+A
Sbjct: 129 KLRDVFVLNHVRGLTYREIAQLRGISVKAVEKRMTQAIA 167