Pairwise Alignments

Query, 576 a.a., membrane protein insertase YidC from Dyella japonica UNC79MFTsu3.2

Subject, 539 a.a., 60 kDa inner membrane insertion protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  235 bits (600), Expect = 3e-66
 Identities = 177/574 (30%), Positives = 268/574 (46%), Gaps = 45/574 (7%)

Query: 1   MNQTRTFLIFALLAVAYLLWMDWEKDYGPKPAPAPVASASTAAVPSADNGGSVPGATSTT 60
           M   R  +  AL  V  + W       G    PAP A     A PSA    + P + S  
Sbjct: 1   MESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETA-PSASQ--AAPQSASQA 57

Query: 61  GAPATVPANGGSATAEAKAQLITISTDVLRLTVDTRGGSVVRSELLHYPSAPVTKKDPSP 120
            APA  P         +  + +T+ T + +  + + GG +    L  Y +A         
Sbjct: 58  AAPA--PRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITA----GA 111

Query: 121 PPVRLLDEQSEHFFVAQSGLATAQGNGASVAPTHLSVFQSAQTAYQLAEGQNELKVDLTW 180
           P V ++D  S    ++  GL     NG     T    F     +  L  GQ+ +   LT+
Sbjct: 112 PAVDMVDTAST--VMSPLGLLI---NGQPSWNTGQWSFDGGDLS--LGAGQSGV---LTF 161

Query: 181 Q-DAAGLKVTKTYALKRGSYDVSMDQKIENGSTVAWQGNAYEQLQRAGQPNNRSWLQNYT 239
             +  G++V +       +Y +S   ++   +        +        PN   +  ++T
Sbjct: 162 TGEVDGVRVVRELTFSADTYLISEKVRLAPLADARTVRLGFTVGTGNLSPNGGQY--DHT 219

Query: 240 DPAAHSFFGAGWYSPQDKFETLPFTDFQKKPLTRSITGGWAAMLQHYFVVAWIPPAQEAN 299
             A        W       E    +D +K  L       W A++ +YF+VA  P   +  
Sbjct: 220 RVA--------WLHDGSFSEKTSASDLEKGVLETGALS-WGAVMSNYFLVAAAPV--DTT 268

Query: 300 GYSTSVVNPDTAQPYYLIRTVGPSLSVAPGQSLTSASRLYLGPKLQGTLDQIAPGLELST 359
           G +   +     +  Y +      +S+  G   T A   + GPK +G L +    L  + 
Sbjct: 269 GVT---LKGKLQEGVYRVAMERGDVSIPAGGETTVACNYWFGPKDRGLLKEAPNQLAEAI 325

Query: 360 NYGWLTVIAQPLHWLLSKLHAISGNWGVAIILLVLLLKAALWKLTAAQFRSGARMRKLQP 419
           N GW ++IA+PL  +L   H   GN+GVAIILL +++K   W L+   ++S  +M+KLQP
Sbjct: 326 NLGWFSIIARPLVDMLEFFHKYVGNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQP 385

Query: 420 RVTALKERYGDDKMKMQQAMMELYKKEKVNPMAGCLPILVTFPVFLGLYRVLMESVELRQ 479
            +  L+E++GDD+ KM + MM LYK  KVNP  GCLP+LV  PVF GLY+ L+ ++ELR 
Sbjct: 386 MLQKLREKHGDDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRH 445

Query: 480 APFFG--------WIHDLSAPDPFFVLPAIYVLVMLATQWLTPTTGMDPTQAKMMKVMPI 531
           A F          W+ DLSA DP+++ P +    ML  Q LTP  G DPTQAK+M  MP+
Sbjct: 446 ASFITHLPFTDMVWLADLSAKDPYYITPIVMGATMLLQQKLTPAPG-DPTQAKIMMFMPV 504

Query: 532 LFAVLFAFFPSGLVLYWVVNGATSLAQQWFITRQ 565
           +F  +F  FPSGLV+YW+ N   S+AQQW++ R+
Sbjct: 505 VFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLRK 538