Pairwise Alignments

Query, 727 a.a., primosomal protein N' from Dyella japonica UNC79MFTsu3.2

Subject, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

 Score =  593 bits (1530), Expect = e-174
 Identities = 334/734 (45%), Positives = 444/734 (60%), Gaps = 12/734 (1%)

Query: 2   PSVLRVALPVPLPTLFDYLPPAAGEARPGSRVLVPFGRGKAVGVVVETEVESALGGARLK 61
           PS+ RV LPVPL   FDYL PA      G RV VPFGR   VG+V     +S     +LK
Sbjct: 3   PSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLK 62

Query: 62  QALRLLDDTPLLDAELMKTLAWAADYWLGAPGEAYANALPLALREDKPLPDTHEEVWALT 121
               +LDD P+   +L   L W + ++    GE YANALP ALR+ K    T  + W LT
Sbjct: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLT 122

Query: 122 VAGRSALDAGSRKGGSRRLLETLAAAPLGAAELHERLPDWRDAARRLAAA---GLIERVR 178
             G+  L  G ++G  ++  + L     GA   H+ L D   ++  L A    G IE   
Sbjct: 123 ALGQEQLMQGVKRGAVKQA-QVLHLLQHGALS-HQTLLDEEVSSTTLKALVEKGWIECEE 180

Query: 179 READAAPQPVTAA-----PALSAEQHAAVDAVGAELGRFQPFLLDGVTGSGKTEVYLALI 233
           R+  A P P         P L+ EQ  A+ AV ++ G F  FLL+GVTGSGKTEVYL LI
Sbjct: 181 RKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLI 239

Query: 234 ERVIAEGKQALLLVPEIGLAPQTVRRVRERLGVPVEVLHSNLAEGDRARAWLRARDGEAR 293
             V+A G+QAL+LVPEIGL PQT+ R R+R  VPVEV+HS L + +R  AWL ARD  A 
Sbjct: 240 TPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAG 299

Query: 294 VILGTRSAVFTPLPRAGLIVVDEEHDGAYKQQEGFRYHARDLALLRGRALGVPVLLGSAT 353
           +++GTRSA+ TP  + G+I+VDEEHD +YKQQ+  RYHARD+A++R     +P++LGSAT
Sbjct: 300 IVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSAT 359

Query: 354 PSLESLANVEAGRYRALHLRARPGAIRPPQVQIVDMRAQRLEHGLSPTLLAAVADAVARG 413
           P+LE+L N  +G+Y  L L  R G   P +   +D++   LE GLS  L+A +   ++ G
Sbjct: 360 PALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAG 419

Query: 414 EQALVFRNRRGYAPVLLCHQCGWHAECPRCEHPLTLHAGRRQLICHHCDYHARLPEHCPS 473
            Q ++F NRRG++P L+CH+CGW AEC RC+   T H    ++ CHHC     +   C  
Sbjct: 420 NQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKG 479

Query: 474 CDAPDLKPQGQGTERLEEALAARFPDTPVLRIDRETTRRRDAFDELLERLRGEGPAILVG 533
           C +  L   G GTE+LE  L   FP+   +RIDR++TRR+ + +  L  +R     IL+G
Sbjct: 480 CGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIG 539

Query: 534 TQMLAKGHDLPNLTLVAIVGVDEGLHSVDFRASERLAQLIVQVAGRAGRASKPGRVILQT 593
           TQMLAKGH  P++TLVA++ VD  L+S DFRASERLAQL +QVAGRAGRASKPG V+LQT
Sbjct: 540 TQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQT 599

Query: 594 HHPDHPLLRQLLAQGYAAAAKELLAERRSVQLPPYMHQVLLRADAHQREHVEAFLHEAYG 653
           HHP+H LL+ LL + Y   A   L ER+  QLPPY    L RA+A+    VE FL +   
Sbjct: 600 HHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRE 659

Query: 654 ML-LPAAAQAELAIAGPMPAPMPLRAGRHRGQLLVEAGSRAVLHAALRPWARGLSALPSA 712
            L       +E  + GP PAP+  RAG+ R QLL++  +R ++   L+     L  LP A
Sbjct: 660 TLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLA 719

Query: 713 RRVRWSLDVDPVDL 726
            +VRWS+D+DP DL
Sbjct: 720 SKVRWSIDIDPQDL 733