Pairwise Alignments

Query, 605 a.a., SLC13 family permease from Dyella japonica UNC79MFTsu3.2

Subject, 575 a.a., TrkA domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  131 bits (330), Expect = 7e-35
 Identities = 142/618 (22%), Positives = 275/618 (44%), Gaps = 67/618 (10%)

Query: 3   LVLGLVGFTMLMLVLEWIRADMVALLVVVVIGLTGLIPSDRVFNGFAGNAVIAIIAIMIM 62
           L + +   T++ LV    R  +V  + ++V+    L+  +++ +  +   ++ ++ +++ 
Sbjct: 7   LTIAIFLATIVGLVRFQNRPALVFGVTLLVLVAFNLVTKEQLLSSMSNPGLVTLVLLILC 66

Query: 63  GAGLDRAGVLG-LTANFVMRMARGVESRLGVVINLVTSLFSAVIPSQALAALMIPVTSRL 121
              L++  +L  + A  ++   R    RL  +    T+L SA++ + A+ A ++   S +
Sbjct: 67  SFALEKTRLLRVIAAKVIVSGYRTTWLRLYGM----TALSSALLNNTAVVATLL---SPI 119

Query: 122 AARTGVPLSRLLLPMAFCILTATNTTLIANSPLIVLNDLIASANANLPPGAHTIPKFGLF 181
                   S+LLLP+++  +     TL+  S  +++N ++  A+               F
Sbjct: 120 RNNPHHVASKLLLPLSYAAILGGTLTLVGTSTNLIVNSMVIDASNQ---------SLSFF 170

Query: 182 SVTPIGLALALFGVLFFYLFTSRLLPEREDERLKVTPGRTESYFADTYGIGGETAELTVT 241
           S T IG AL + G        SR LP+   +        ++ YF D            V 
Sbjct: 171 SFTAIG-ALLVLGCGLVLRIASRWLPDIAHQETC-----SKGYFIDA----------KVV 214

Query: 242 AESPLVGMSIGE--VEQLYGAPLILAIKSGTEARMAPPV---------DHVIWVGSVLGV 290
           A S L+G S+ +  +  L    L+  +++G   R+  PV         D +I+ G +  V
Sbjct: 215 AGSELIGRSVEDNGLRHLESLFLVEVVRNG---RLISPVTPTEVLQQDDRLIFSGDIAKV 271

Query: 291 LGPREQLGQFANNQLCKLSPRMRQLGELFNPSRAGISEAVIPPSSRFIKQTVGELRLRKR 350
           +    QL QF+          +    E      + ++E V+   S  + +T+ +   R  
Sbjct: 272 M----QLSQFSG---------LEMFAEKNGLLDSNLTEVVVKQESVLVGKTMKKAGFRAL 318

Query: 351 HGISVLAVNRGDQVFRDDVRAVSLRAGDTLVLHSSWRDLALASEDKDLVVVTDIPKEEQR 410
              + +A+ R  +     +  V ++AGD LVL      L   +  K+ +V++ +  E + 
Sbjct: 319 FDAAAVAIRRDGEEISGKLGEVQIKAGDFLVLAVGKDFLTRHNISKNFIVISGVEPETRN 378

Query: 411 PGK-IWQAVGFFVLAKCLALFTHLDLSVAMMTGAIGMLLTGVLNMDEAYKAINWKTIFVT 469
            GK  W ++G FVL   LA    +++   M+     ++ T  LN++E  +        V 
Sbjct: 379 NGKKAWISIGGFVLTLVLAATGVVEMLQGMLLLLGVLIFTQCLNVNEVVRRFPVDIWLVV 438

Query: 470 ACLIPLGWSMDATGTAAWLAQEVLQHLGNASPYVLQLSLAIL---TLLFSQVMSNVGATV 526
           A  I L  ++  +G A  +A  V    G A    L L+L ++   T L +++++N  A  
Sbjct: 439 ASAILLSHALVNSGVAELVASWVE---GTAEKEHLMLALLLVYLATWLMTELITNNAAAA 495

Query: 527 MMVPIAISVAVATGGNPSAYALIVAVSSSNTFLLSSGHPALMMVAGPGGYRGKDFLRVGL 586
           +M PIA S+A+  G +   + + VA ++S +F+   G+   +MV   G YR  DF++VG+
Sbjct: 496 LMFPIAYSIALGFGVDFLPFVMTVAFAASGSFISPYGYQTNLMVYNAGRYRLMDFVKVGV 555

Query: 587 PLTAMVLLITLVAINLMF 604
           P++     I L+ + L F
Sbjct: 556 PVSLTYGAIVLLTVPLFF 573



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 26/139 (18%)

Query: 1   MILVLGLVGFTMLMLVLEWIRADMVALLVVVVIGLTGLIPSDRVFNGFAGNAVIAIIAIM 60
           M+L+LG++ FT  + V E +R   V + +VV                          + +
Sbjct: 408 MLLLLGVLIFTQCLNVNEVVRRFPVDIWLVVA-------------------------SAI 442

Query: 61  IMGAGLDRAGVLGLTANFVMRMARGVESRLG-VVINLVTSLFSAVIPSQALAALMIPVTS 119
           ++   L  +GV  L A++V   A      L  +++ L T L + +I + A AALM P+  
Sbjct: 443 LLSHALVNSGVAELVASWVEGTAEKEHLMLALLLVYLATWLMTELITNNAAAALMFPIAY 502

Query: 120 RLAARTGVPLSRLLLPMAF 138
            +A   GV     ++ +AF
Sbjct: 503 SIALGFGVDFLPFVMTVAF 521