Pairwise Alignments

Query, 662 a.a., selenocysteine-specific translation elongation factor from Dyella japonica UNC79MFTsu3.2

Subject, 394 a.a., elongation factor Tu (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  132 bits (331), Expect = 4e-35
 Identities = 112/383 (29%), Positives = 170/383 (44%), Gaps = 35/383 (9%)

Query: 3   VGTAGHIDHGKTSLIKALTGVDG-------------DRLKEEKARGITIDLGFAYLPLAD 49
           +GT GH+DHGKT+L  A+T V               D   EEK RGITI+        A+
Sbjct: 15  IGTIGHVDHGKTTLTAAITTVLAKKGLSELRSFDSIDNAPEEKERGITINTSHVEYETAN 74

Query: 50  GTTLGFVDVPGHERFVHTMVAGASGIDIALLVVAADDGVMPQTLEHLAILDLLQIRRGLI 109
                 VD PGH  +V  MV GA+ +D A++V AA DG MPQT EH+ +   + + R ++
Sbjct: 75  -RHYAHVDCPGHADYVKNMVTGAAQMDGAIIVCAATDGPMPQTREHILLARQVNVPRLVV 133

Query: 110 ALTKVDLAPPGRLAEVGAQIRAATAGSVLEAADVFPISSTTGLGI--------DALRERL 161
            L K D+     + E+                D  PI   + LG         D + E +
Sbjct: 134 FLNKCDMVDDEEMLELVEMEMRELLSFYDFDGDNTPIIQGSALGALNGVEKWEDKVMELM 193

Query: 162 AAEAH--TLGERAADGRFRLAVDRVFTLPGIGLTVTGTVLSGAVRVKDQMMLSPSGLSAR 219
            A  +   L  R  D  F + V+ VF++ G G   TG + SG + V D++ +   G   +
Sbjct: 194 DAVDNWIPLPPRDVDKPFLMPVEDVFSITGRGTVATGRIESGIIHVGDEVEILGLGEDKK 253

Query: 220 --VRSLHAQNRAVELGRAGDRCALNLAGDGVAKDAIRRGDMVVDPFLHAPVDRIDARLLL 277
             V  +    + ++ G AGD   L L   GV K+ I+RG ++  P    P  R  A + +
Sbjct: 254 SVVTGVEMFRKLLDQGEAGDNVGLLLR--GVDKNEIKRGMVLCKPGQIKPHSRFKAEVYI 311

Query: 278 LP----GEPKPIGQWFPARLHHGASEVGARVVLIEG-EQLAPGHAADVQLVLNRPIAAAA 332
           L     G   P    +  + +    +    + L EG E + PG    + + L  P+A   
Sbjct: 312 LKKEEGGRHTPFHNKYRPQFYLRTMDCTGEITLPEGTEMVMPGDNVTITVELIYPVALNP 371

Query: 333 LDRFVLRDVSAQRTIGGGQFLDL 355
             RF +R+    RT+G GQ  ++
Sbjct: 372 GLRFAIRE--GGRTVGAGQITEI 392