Pairwise Alignments

Query, 662 a.a., selenocysteine-specific translation elongation factor from Dyella japonica UNC79MFTsu3.2

Subject, 673 a.a., selenocysteine-specific translation elongation factor SelB (RefSeq) from Shewanella sp. ANA-3

 Score =  321 bits (823), Expect = 6e-92
 Identities = 221/631 (35%), Positives = 330/631 (52%), Gaps = 31/631 (4%)

Query: 1   MIVGTAGHIDHGKTSLIKALTGVDGDRLKEEKARGITIDLGFAYLPLADGTTLGFVDVPG 60
           MI+ TAGH+DHGK++LI+ALTG++ DRL EEK RG+TIDLG+A++PL DGT L F+DVPG
Sbjct: 1   MIMVTAGHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMPLRDGTRLAFIDVPG 60

Query: 61  HERFVHTMVAGASGIDIALLVVAADDGVMPQTLEHLAILDLLQIRRGLIALTKVDLAPPG 120
           HE+F++ M+ G S +  ALLV+A DDGVMPQT EHL IL LL +    + LTK DL    
Sbjct: 61  HEKFINNMLVGVSHVRHALLVLACDDGVMPQTREHLQILALLPLNSLTLVLTKRDLVDDQ 120

Query: 121 RLAEVGAQIRAATAGSVLEAADVFPISSTTG--LGIDALRERLAAEAHTLGERAAD-GRF 177
             A++  +  A  A   +EA+ VF + +      G+D L++ +   A     +A D   F
Sbjct: 121 TAAKLTLEGMALLAEYGIEASGVFEVCANDAGDAGVDTLKQHILDIAELQSTQAEDASSF 180

Query: 178 RLAVDRVFTLPGIGLTVTGTVLSGAVRVKDQMMLSPSGLSARVRSLHAQNRAVELGRAGD 237
           R+ +DR F++ G G  VTGTV+SG+V + D +  S      RVR +H Q   V    +G 
Sbjct: 181 RMTLDRAFSVKGAGCVVTGTVISGSVCIGDSLYSSGQKAKLRVRGIHCQGMEVHRALSGT 240

Query: 238 RCALNLAGDGVAKDAIRRGDMVVDPFLHAPVDRIDARLLLLPGEPKPIGQWFPARLHHGA 297
           R ALNL G    + A  RGD +       P   + AR ++     +P+  W     HHGA
Sbjct: 241 RVALNLTGVDNHR-APARGDWLSS----LPQAELCARPVVQIRSFEPLTHWQNVHCHHGA 295

Query: 298 SEVGARVVLIEGEQLAPGHAADVQLVLNRPIAAAALDRFVLRDVSAQRTIGGGQFLDLRA 357
                RV L++       + A++  VL++P+     D  VLR +  ++T+G G+ L L+ 
Sbjct: 296 DHTLGRVSLLDEADEQGRYLAEI--VLDKPLLLCQDDPIVLRHIGGKQTLGAGRVLALKV 353

Query: 358 PPRQRRTAER--QAQRAARLLADPLEAFAALLDTPPFAWDLTAFARDRALSQSRIDSIVK 415
           P R++RT ER  + Q+ A+ L++P+   A L  T   + D   +         R     +
Sbjct: 354 PNRKKRTPERVSKLQQLAQ-LSNPVNVLALLGQTEALSIDEIRW---------RWQLTDE 403

Query: 416 SLAPVLFATGEERIAVGQVHWQ---RFVARLVEHLETFHAANPDLQGIGRERLRLALQPR 472
            LA +L   G  R+    +  Q   +   + ++ L  +H  +PD  G+GR RL+      
Sbjct: 404 GLAAMLAQAGLTRLGAYGLSTQLLEQEKQQFIDLLREYHQQHPDQLGLGRNRLQRMSHNV 463

Query: 473 LPAPAFALALQHPDLAARIVRDGAFVRLPGHTMRLGPEREALWQALAPLLGGEARFRPPR 532
           LP+      L       ++V  GA ++L  H + L  E +  WQ LAP L  +    P  
Sbjct: 464 LPSELANKVLDSLCQEGQMVLRGALLQLADHRIVLDSEAQQCWQRLAPWLAQQT--SPVW 521

Query: 533 VRDLAWMLARQEAEIRQLLKFAARLGRVDEVAHDHFFLRATM-HEMTLIAADLAAGAPDG 591
           V ++   L  + A++R L     + G +  V  D + L   + H   L+ A +      G
Sbjct: 522 VTEMGEYLELEPAKLRLLCFQLVQQGFITAVVKDRYLLSEQLCHYANLVRAHVET---HG 578

Query: 592 CFTAAQFRDRVDNGRKVAIQILEFFDRQGVT 622
               A+F+D +  GRKV+IQ+LEFFDR G T
Sbjct: 579 KLETAEFKDLIGLGRKVSIQLLEFFDRSGFT 609