Pairwise Alignments

Query, 590 a.a., thiamine pyrophosphate-dependent enzyme from Dyella japonica UNC79MFTsu3.2

Subject, 605 a.a., thiamine pyrophosphate enzyme-like TPP binding region (RefSeq) from Shewanella amazonensis SB2B

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 23/288 (7%)

Query: 43  VFQIPGDYVKHFTQALEYFDGVNTIGAINELDAAYAADAYARTRGLAAVSLQFGVSTYSA 102
           V+ + GD+V +   AL+    +  + + NE+ A ++A A A   GL A    + V +   
Sbjct: 35  VYGVGGDFVANLINALD--GPLQVLPSSNEMHAGFSACAQAELTGLGACLTTYTVGSLPC 92

Query: 103 LNAIAGAWVERSPIVVISATPGADMRDITDMYDVLFHHSTG---DLNSDRAIYEYVTVKA 159
           ++A A A  E  P++ +S  PG +      ++ ++ H  +G   DLN+    ++ + ++A
Sbjct: 93  VSAAALARTEGLPVIFMSGAPGENEIQGHALHHMV-HPGSGWHTDLNAALNAFKALGIRA 151

Query: 160 ITL-------STNVGAAEQIDELLVDAITEKRPVYIACYKEVWGQPCERPPATPLKPRVT 212
             L         NV AA +  EL+ +A+  ++PVYI   +++  QP +          + 
Sbjct: 152 ERLQGQRHQGQPNVAAA-RFFELVCEAVQSRQPVYIEVPRDLVMQPTQSLRLPLNIDELN 210

Query: 213 RSPELALRNA---VDQAWAMITQAKSPLIFAGVEVLRFGLSGLLQKII---DASGFLYTT 266
               L L  A    D   + + +AK PL++ G E LR   S LL++I+      G  Y T
Sbjct: 211 AMTRLNLAGAGLIADDICSRLVKAKHPLVYLG-ERLRMN-SALLERIVHFCQRLGLPYAT 268

Query: 267 TTLGKSVLDEQGDKFIGTYSDAAS-IEAVREIVMASDCVLTLGAIITD 313
           +   K ++DE     +G Y+   S       I   +D VL  G  I D
Sbjct: 269 SWFAKGMVDESHPLCLGAYNGVFSQCRGQAYIEENADYVLEFGTAIYD 316



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 462 GSGKRAWTVAGDGGFMMVCQSLSTLARNQLNAVIFVMSNQVYAIEQVYVDMSAFKPGPKH 521
           GS +    + GDGGF   C  L  L +   N +I  M N ++ +          K G   
Sbjct: 461 GSPQPILLITGDGGFNFQCNELINLQKQNANLIILYMRNNLFHLG---------KCGDAP 511

Query: 522 KFDAFDILPKWDYLALAKAFGAEGIRVETVDELNAAL 558
            +   D+  ++D   L  A+G +    ++VD L  AL
Sbjct: 512 IYACNDL--RFDVSKLIAAYGGKYHLCQSVDRLYEAL 546