Pairwise Alignments

Query, 419 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Dyella japonica UNC79MFTsu3.2

Subject, 370 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Pseudomonas stutzeri RCH2

 Score =  196 bits (499), Expect = 7e-55
 Identities = 145/388 (37%), Positives = 212/388 (54%), Gaps = 46/388 (11%)

Query: 14  PEQRRPSVGVRIGKVTVGGGAPIVVQSMTNTDTEDPASTARQIAELARAGSELVRITVNT 73
           P +RR S  + +G V VGG API VQSMTNT+T D  +T  QI  LA AG+++VR++V +
Sbjct: 6   PIKRRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPS 65

Query: 74  PAAAAAVPRIHERLQMMGVEVPIIGDFHYNGHQLLEQEPACAEVLAKYRINPGNVGFGKK 133
             AA A  RI +RL    V++P++ D H++    L       + L   RINPGN+G    
Sbjct: 66  MEAAEAFGRI-KRL----VQLPLVADIHFDYQIALRVAELGVDCL---RINPGNIG---- 113

Query: 134 KDSQFAAIIEKAIQYGKPVRIGANWGSLDQSMVAALMDENHTRAEPWDAALVAREALIRS 193
           ++ +  A+++ A   G P+RIG N GSL++       D      EP   ALV  E+ +R 
Sbjct: 114 REDRVRAVVDAARDKGIPIRIGVNAGSLEK-------DLQKKYGEPTPQALV--ESALRH 164

Query: 194 AVDSAIRAEEIGLPRERIILSCKVSGVQELIAVYRDLARRCDYALHLGLTEAGMGSKGIT 253
            VD   R     L  +   +S K S V   +  YR LA + +  LHLG+TEAG    G  
Sbjct: 165 -VDHLDR-----LDFQDFKVSVKASDVFMAVEAYRLLAGQIEQPLHLGITEAGGLRSGTV 218

Query: 254 ASSAALAVLLQEGIGDTIRISLTPEPGAPRTGEVVVAQELLQTMGLRAFTPLVTACPGCG 313
            S+  L +LL +GIGDTIR+SL  +P      E+ V  ++L+++ LR+      ACP C 
Sbjct: 219 KSAVGLGMLLADGIGDTIRVSLAADP----VEEIKVGFDILKSLRLRSRGINFIACPSCS 274

Query: 314 RTTSEFFQELAKTVQEHVRDRMPEWRVKYDGVENLTLAVMGCVVNGPGESKHANIGISLP 373
           R       ++ KT+ E +  R+ +  V  D      +AV+GCVVNGPGE+K A++G++  
Sbjct: 275 RQNF----DVVKTMNE-LEARVEDLLVPMD------VAVIGCVVNGPGEAKEAHVGLT-- 321

Query: 374 GNGEAPAAPVFIDGEKAMTLRGERIAEE 401
             G +P   V+IDG+ A  L  E + +E
Sbjct: 322 --GGSPNNLVYIDGKPAQKLNNENLVDE 347