Pairwise Alignments

Query, 419 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Dyella japonica UNC79MFTsu3.2

Subject, 372 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Marinobacter adhaerens HP15

 Score =  186 bits (471), Expect = 1e-51
 Identities = 138/403 (34%), Positives = 212/403 (52%), Gaps = 52/403 (12%)

Query: 14  PEQRRPSVGVRIGKVTVGGGAPIVVQSMTNTDTEDPASTARQIAELARAGSELVRITVNT 73
           P  RR S  + +G V VGG API VQSMTNT+T D  +T  QI  L  AG+++VR++V +
Sbjct: 6   PIIRRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVEATVGQIKALQEAGADIVRVSVPS 65

Query: 74  PAAAAAVPRIHERLQMMGVEVPIIGDFHYNGHQLLEQEPACAEVLAKYRINPGNVGFGKK 133
             AA A  +I E+     V +P++ D H++    L       + L   RINPGN+G    
Sbjct: 66  MDAAEAFGKIREQ-----VSLPLVADIHFDYKIALRVAELGVDCL---RINPGNIG---- 113

Query: 134 KDSQFAAIIEKAIQYGKPVRIGANWGSLDQSMVAALMDENHTRAEPWDAALVAREALIRS 193
           +D + +A+I  A     P+RIG N GSL++S+            EP   AL         
Sbjct: 114 RDDRVSAVISAARDGNIPIRIGVNAGSLEKSL-------QRKYGEPTADAL--------- 157

Query: 194 AVDSAIRAEEIGLPR---ERIILSCKVSGVQELIAVYRDLARRCDYALHLGLTEAGMGSK 250
            V+SA+R  +I L R   +   +S K S V   +  YR +A++ +  LHLG+TEAG    
Sbjct: 158 -VESAMRHIDI-LDRHDFQDFKVSLKASEVFMTVDAYRKIAQQIEQPLHLGITEAGGLRS 215

Query: 251 GITASSAALAVLLQEGIGDTIRISLTPEPGAPRTGEVVVAQELLQTMGLRAFTPLVTACP 310
           G   SS  L +LL +GIGDTIR+SL  +P      E+ V  ++L+++ LR+      ACP
Sbjct: 216 GTVKSSIGLGMLLMDGIGDTIRVSLAADP----VQEIKVGFDILKSLRLRSRGINFIACP 271

Query: 311 GCGRTTSEFFQELAKTVQEHVRDRMPEWRVKYDGVENLTLAVMGCVVNGPGESKHANIGI 370
            C R   +  Q +             E R++ D  ++L +A++GC+VNGPGE+K A++G+
Sbjct: 272 SCSRQNFDVIQTMNDL----------EARLE-DVNDSLDVAIIGCIVNGPGEAKVADLGL 320

Query: 371 SLPGNGEAPAAPVFIDGEKAMTLRGERIAEEFIGILDDYVARR 413
           +    G +P    ++ G+    L    + ++   ++ + VARR
Sbjct: 321 T----GGSPKNLFYMAGKPNQKLDNATLTDDLERLIREEVARR 359