Pairwise Alignments

Query, 419 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Dyella japonica UNC79MFTsu3.2

Subject, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Caulobacter crescentus NA1000

 Score =  174 bits (440), Expect = 5e-48
 Identities = 131/402 (32%), Positives = 201/402 (50%), Gaps = 45/402 (11%)

Query: 10  RPAEPEQRRPSVGVRIGKVTVGGGAPIVVQSMTNTDTEDPASTARQIAELARAGSELVRI 69
           RP     RR S  +R+G V VGG API VQSMTNT T D A+T  QI +L  AG+++VR+
Sbjct: 9   RPWRMITRRQSRKIRVGSVEVGGDAPISVQSMTNTLTSDAAATLEQIRQLEEAGADIVRV 68

Query: 70  TVNTPAAAAAVPRIHERLQMMGVEVPIIGDFHYNGHQLLEQEPACAEVLAKYRINPGNVG 129
           +     + AA   I         +VP++ D H++  + +E   A A  L   RINPGN+G
Sbjct: 69  SCPDVESTAAFKTIARE-----AKVPLVADIHFHYKRGIEAAQAGAACL---RINPGNIG 120

Query: 130 FGKKKDSQFAAIIEKAIQYGKPVRIGANWGSLDQSMVAALMDENHTRAEPWDAALVAREA 189
                  +   +I+ A  +G  +RIG N GSL++ ++           EP        +A
Sbjct: 121 ----SPDRVRDVIQAARDHGCSMRIGVNAGSLERELL-------EKYGEP------CPDA 163

Query: 190 LIRSAVDSAIRAEEIGLPRERIILSCKVSGVQELIAVYRDLARRCDYALHLGLTEAGMGS 249
           ++ SA++ A   ++      +I  S K S     +A Y  LA   D  LHLG+TEAG   
Sbjct: 164 MVESALNHARILQDHDFHEFKI--SVKASDPFMTVAAYYQLAEAIDCPLHLGVTEAGATR 221

Query: 250 KGITASSAALAVLLQEGIGDTIRISLTPEPGAPRTGEVVVAQELLQTMGLRAFTPLVTAC 309
            G   S+  +  +L  GIGDTIR+SL  +P      E+ V  ++L+++GLR     + AC
Sbjct: 222 TGTVKSAIGIGAMLWAGIGDTIRVSLAADP----VEEIKVGFDILKSLGLRHRGVNIIAC 277

Query: 310 PGCGRTTSEFFQELAKTVQEHVRDRMPEWRVKYDGVENLTLAVMGCVVNGPGESKHANIG 369
           P C R        + KTV E + +R+            ++L+++GCVVNGPGE+   +IG
Sbjct: 278 PSCARQGF----NVIKTV-EALEERLAHISTP------MSLSIIGCVVNGPGEALMTDIG 326

Query: 370 ISLPGNGEAPAAPVFIDGEKAMTLRGERIAEEFIGILDDYVA 411
            +    G A A  V++ G+       E + +  + +++   A
Sbjct: 327 FT---GGGAGAGMVYMAGKPDHKQSNEGMIDHIVDLVEKKAA 365