Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 519 a.a., nitrogenase iron-iron protein, alpha chain (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (510), Expect = 8e-56
 Identities = 117/422 (27%), Positives = 212/422 (50%), Gaps = 11/422 (2%)

Query: 46  SLAGAVSQRACVFCGSRVVL-YPIADALHLVHGPVGCAAYTWDIRGALSSGPELH-RLSF 103
           ++ G++S+R C +CG++ V+  P+ D +H+ HGP+GC   TW  +  +S       + ++
Sbjct: 39  TIPGSISERGCAYCGAKHVIGQPMKDVIHISHGPIGCTYDTWQTKRYISDNNNFQLKYTY 98

Query: 104 STDLGERDIIFGGEPKLEAALDELITRHAP-KAAFVYATCIVGLIGDDIGAVCKRVAAR- 161
           +TD+ E+ I+FG E  L+  + E        K   +Y TC   LIGDDI A+   V    
Sbjct: 99  ATDVREKHIVFGAEKLLKQNILEAFKAFPDIKRMTIYQTCATALIGDDIDAIASEVMDEL 158

Query: 162 HGIPVLPVQSEGFKGNKREG--YEAACAAMFTLTGTGATDGIGPASVNILGDFNLAGELW 219
             + +    S GF G  + G  ++   A +    GT   +      +N +G++N+ G+  
Sbjct: 159 PDVDIFVCNSPGFAGPSQSGGHHKINIAWVNQKVGTVEPEITSDYVINYVGEYNIQGDQE 218

Query: 220 IIRGYLERMGVQVVANITGDGRVDDLRRCHGAALNLVQCSGATMPLARMMREAYGTPTLR 279
           +++ Y  RMG+Q+++  TG+G  D LR  H A LN+++C+ +   +   +R  YG P L 
Sbjct: 219 VMQDYFNRMGIQILSTFTGNGSYDGLRAMHRAHLNVLECARSAEYICNELRVRYGIPRLD 278

Query: 280 VSYLGIEDMADSLYNVAEHFREVCPGIVERTRDLVREEIATLMPRLRQLRRDLEGKRAAI 339
           +   G E ++DSL  +   F     GI +R + ++ EE A   P+L   +  L GK+  +
Sbjct: 279 IDGFGFEPLSDSLRKIGLFF-----GIEDRAQAIIDEETAKWKPQLDWYKERLRGKKVCL 333

Query: 340 YVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYRELEAICDPGTIIVDDANALELAHF 399
           + GG+            +G+ V  + ++ G   D  +  A C  G + +DD N LE    
Sbjct: 334 WPGGSKLWHWAHVIQEEMGLNVVSLYTKFGHQGDMEKGIARCGEGALAIDDPNELEGLEA 393

Query: 400 VRTLDVDIFVGGVKERPIAHKLGIGFCDHNHERKIALAGFEGMYNFAREVHASVTSPVWR 459
           +  L  DI + G +   +A K+ + + + +        G+EG   FAR+++ ++ SP+++
Sbjct: 394 LEMLKPDIILTGKRPGEVAKKVRVPYLNAHAYHNGPYKGYEGWVRFARDIYNAIYSPIFQ 453

Query: 460 FT 461
            +
Sbjct: 454 LS 455