Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 510 a.a., Nitrogenase molybdenum-iron protein beta chain (NCBI) from Rhodospirillum rubrum S1H

 Score = 54.3 bits (129), Expect = 1e-11
 Identities = 80/343 (23%), Positives = 130/343 (37%), Gaps = 20/343 (5%)

Query: 54  RACVFCGSRVVLYPIADALHLVHGPVGCAAYTWDIRGALSSGPELHRLSFSTDLGERDII 113
           +AC   G+          L  VHG  GCAAY    R  LS   +      S  + E   +
Sbjct: 68  KACQPLGALFAAAGFDGTLGYVHGSQGCAAY---FRSHLSRHFKEASSVVSDSMTEDAAV 124

Query: 114 FGGEPKLEAALDELITRHAPKAAFVYATCIVGLIGDDIGAVCKRVAARHGIPV-LPV--- 169
           FGG   +   L      + PK   V  +C+  +IGDDI +       +  IP   PV   
Sbjct: 125 FGGLNNMVDGLANAYALYKPKMIAVCTSCMAEVIGDDISSFIGNAKTKESIPADFPVPFA 184

Query: 170 QSEGFKGNKREGYEAACAAMFTLTGTGATDGIGPASVNILGDFN--LAGELWIIRGYLER 227
            +  F G+   GY+     + T    G         +NI+  F+    G +  ++  L  
Sbjct: 185 HTPSFVGSHIVGYDNMMKGILTTFWDGKVRDAATDKINIIPGFDGYSVGNIRELKRILGM 244

Query: 228 MGVQ-VVANITG---DGRVDDLRRCHGAALNLVQCSGATMPLARMMREAYGTP-TLR-VS 281
           +GV+  V + T    D   D   R +           A    A +    Y TP TL+ ++
Sbjct: 245 IGVEYTVLSDTSDVYDTPTDGEFRMYDGGTTQDDTIAALQAKATLSLSEYCTPATLKFIA 304

Query: 282 YLGIEDMADSLYNVAEHFREVCPGIVERTRDLVREEIATLMPRLRQLRRD----LEGKRA 337
             G E  A +         +    +V  T   + E +     RL     D    L GK+ 
Sbjct: 305 ETGQETAAFNYPMGVGATDDFLVKLVALTGKDIPEALTKERGRLVDALADSMTWLHGKKM 364

Query: 338 AIYVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYRELEAI 380
           A+Y G      S+++    +G++   V +  GT +  ++++A+
Sbjct: 365 AVY-GDPDFTLSMVRFLLEMGVEPVHVLATNGTKKWEKQVKAL 406