Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 487 a.a., Nitrogenase molybdenum-iron protein alpha chain (NCBI) from Rhodospirillum rubrum S1H

 Score =  236 bits (603), Expect = 1e-66
 Identities = 142/456 (31%), Positives = 238/456 (52%), Gaps = 18/456 (3%)

Query: 28  GQVHRAGQGP-IDLACNRESLAGAVSQRACVFCGSRVVLY-PIADALHLVHGPVGCAAYT 85
           G +   G+G    +  N +++ G ++ R C + GS+ V++ P+ D +H+ HGPVGC  Y+
Sbjct: 36  GTIVAEGEGSSCGVKSNVKAIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHGPVGCGQYS 95

Query: 86  WDIRGALSSGP----ELHRLSFSTDLGERDIIFGGEPKLEAALDELITRHA-PKAAFVYA 140
           W  R    +G         + F++D  E+DI+FGG+ KLE  +DE+       +   + +
Sbjct: 96  WSQRRNYFTGQVGVDSFVTMQFTSDFQEKDIVFGGDKKLEKVIDEIKGLFPLVRGISIQS 155

Query: 141 TCIVGLIGDDIGAVCKRVAARHGIPVLPVQSEGFKGNKRE-GYEAACAAM----FTLTGT 195
            C +GLIGDDI AV ++ A   G+P++PV+ EGF+G  +  G+  A  A+    F+    
Sbjct: 156 ECPIGLIGDDIEAVARKKAKDVGLPIIPVRCEGFRGVSQSLGHHIANDAIRDWVFSRDSE 215

Query: 196 GATDGIGPASVNILGDFNLAGELWIIRGYLERMGVQVVANITGDGRVDDLRRCHGAALNL 255
            A +   P  VNI+GD+N+ G+ W  R  LE MG++V+A  +GD  + ++ R   A LNL
Sbjct: 216 SAFETT-PYDVNIIGDYNIGGDAWASRILLEEMGLRVIAQWSGDATIAEMERAPKAKLNL 274

Query: 256 VQCSGATMPLARMMREAYGTPTLRVSYLGIEDMADSLYNVAEHFREVCPGIVERTRDLVR 315
           + C  +   + R M E +G P +  ++ G   +  SL  +A +F E    I ++  +++ 
Sbjct: 275 IHCYRSMNYICRHMEEKHGVPWMEYNFFGPSQIEKSLRAIAANFDET---IQKKAEEVIA 331

Query: 316 EEIATLMPRLRQLRRDLEGKRAAIYVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYR 375
               T+   + + +  LEGKR  +YVGG  +   ++ A+  LGMQ+   G +    +DY+
Sbjct: 332 AHRPTVDAVINKYKARLEGKRVMLYVGG-LRPRHVMTAYEDLGMQICGAGYEFAHSDDYQ 390

Query: 376 ELEAICDPGTIIVDDANALELAHFVRTLDVDIFVGGVKERPIAHKLGIGFCD-HNHERKI 434
                   GT+I DD    EL  F+  L  D+   G+KE+    K+G+ F   H+ +   
Sbjct: 391 RTTEYAKEGTLIYDDLTGYELERFIEKLRPDLVGSGIKEKYAVQKMGVPFRQMHSWDYSG 450

Query: 435 ALAGFEGMYNFAREVHASVTSPVWRFTPRSRFPAAA 470
              G++G   FAR++  ++ +PVW         AAA
Sbjct: 451 PYHGYDGFAIFARDMDMAINNPVWALLKAPWTKAAA 486