Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 487 a.a., nitrogenase molybdenum-iron protein alpha chain from Rhodopseudomonas palustris CGA009

 Score =  223 bits (568), Expect = 1e-62
 Identities = 143/437 (32%), Positives = 226/437 (51%), Gaps = 26/437 (5%)

Query: 43  NRESLAGAVSQRACVFCGSRVVLY-PIADALHLVHGPVGCAAYTWDIRGALSSGPE---- 97
           N +S+ G ++ R C + GS+ V++ PI D +H+ HGPVGC  Y+W  R     G      
Sbjct: 54  NIKSIPGVMTIRGCAYAGSKGVVWGPIKDMVHISHGPVGCGQYSWGSRRNYYKGTTGVDT 113

Query: 98  LHRLSFSTDLGERDIIFGGEPKLEAALDELITRHA-PKAAFVYATCIVGLIGDDIGAVCK 156
              + F++D  E+DI+FGG+ KL   +DE+       K   V + C +GLIGDDI AV K
Sbjct: 114 FGTMQFTSDFQEKDIVFGGDKKLGKIIDEIQELFPLSKGISVQSECPIGLIGDDIEAVSK 173

Query: 157 RVAARH-GIPVLPVQSEGFKGNKRE-GYEAACAAM----FTLTGT-GATDGIGPASVNIL 209
             + ++ G P++PV+ EGF+G  +  G+  A   +    F   G   A     P  V I+
Sbjct: 174 AKSKQYDGKPIIPVRCEGFRGVSQSLGHHIANDVIRDWVFDKAGEKNAGFQSTPYDVAII 233

Query: 210 GDFNLAGELWIIRGYLERMGVQVVANITGDGRVDDLRRCHGAALNLVQCSGATMPLARMM 269
           GD+N+ G+ W  R  LE MG++V+A  +GDG + +L     A LN++ C  +   + R M
Sbjct: 234 GDYNIGGDAWASRILLEEMGLRVIAQWSGDGTIAELENTPKAKLNILHCYRSMNYITRHM 293

Query: 270 REAYGTPTLRVSYLGIEDMADSLYNVAEHF----REVCPGIVERTRDLVREEIATLMPRL 325
            E +G P +  ++ G   +  SL  +A  F    +E    ++ + +  +   IA   PR 
Sbjct: 294 EEKFGIPWVEYNFFGPTKIEASLREIASKFDDKIKEGAERVIAKYKPQMEAVIAKYRPR- 352

Query: 326 RQLRRDLEGKRAAIYVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYRELEAICDPGT 385
                 LEGK+  +YVGG  +   +I A+  LGM+V   G + G ++DY+        GT
Sbjct: 353 ------LEGKKVMLYVGG-LRPRHVIGAYEDLGMEVVGTGYEFGHNDDYQRTTHYVKDGT 405

Query: 386 IIVDDANALELAHFVRTLDVDIFVGGVKERPIAHKLGIGFCD-HNHERKIALAGFEGMYN 444
           +I DD    E   FV  +  D+   GVKE+ I  K+G+ F   H+ +      G++G   
Sbjct: 406 LIYDDVTGYEFEKFVEKVRPDLVGSGVKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFGI 465

Query: 445 FAREVHASVTSPVWRFT 461
           FAR++  ++ +PVW+ T
Sbjct: 466 FARDMDIAINAPVWKLT 482