Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 522 a.a., nitrogenase iron-iron protein, alpha chain from Rhodopseudomonas palustris CGA009

 Score =  197 bits (500), Expect = 1e-54
 Identities = 124/420 (29%), Positives = 209/420 (49%), Gaps = 15/420 (3%)

Query: 46  SLAGAVSQRACVFCGSRVVL-YPIADALHLVHGPVGCAAYTWDIRGALSSGPELH-RLSF 103
           ++ G++S+R C +CG++ V+  P+ D +H+ HGPVGC   TW  +  +S       + +F
Sbjct: 39  TIPGSISERGCAYCGAKHVIGTPMKDVIHMSHGPVGCTYDTWQTKRYISDNNNFQLKYTF 98

Query: 104 STDLGERDIIFGGEPKLEAALDELITRHAP--KAAFVYATCIVGLIGDDIGAVCKRVAAR 161
           +TD+ E+ I+FG E  L+  + E   +  P  K   +Y TC   LIGDDI AV   V   
Sbjct: 99  ATDVREKHIVFGAEGLLKQNIIEAF-KACPDIKRMTIYQTCATALIGDDINAVAAEVMEE 157

Query: 162 H-GIPVLPVQSEGFKGNKREG--YEAACAAMFTLTGTGATDGIGPASVNILGDFNLAGEL 218
              + +    S GF G  + G  ++   A +    GT   +      +N +G++N+ G+ 
Sbjct: 158 MPDVDIFTCNSPGFGGPSQSGGHHKINIAWINDKVGTVEPEITSDYVINYVGEYNIQGDQ 217

Query: 219 WIIRGYLERMGVQVVANITGDGRVDDLRRCHGAALNLVQCSGATMPLARMMREAYGTPTL 278
            ++  Y  RMG+QV++  TG+G  D LR  H A LN+++C+ +   +   +R  YG P L
Sbjct: 218 EVMLDYFTRMGIQVLSTFTGNGTYDGLRAMHRAHLNVLECARSAEYICNELRVRYGIPRL 277

Query: 279 RVSYLGIEDMADSLYNVAEHFREVCPGIVERTRDLVREEIATLMPRLRQLRRDLEGKRAA 338
            +   G E ++ SL  +   F     GI +R   ++ EE A   P L   +  L+GK+  
Sbjct: 278 DIDGFGFEPLSQSLRKIGMFF-----GIEDRAEAIIAEETARWKPELDWYKERLKGKKVC 332

Query: 339 IYVGGAFKAFSLIKAF-RHLGMQVALVGSQTGTDEDYRELEAICDPGTIIVDDANALELA 397
           ++ GG+ K +    A    +G++V  V ++ G   D  +  A C    + +DD N LE  
Sbjct: 333 LWPGGS-KLWHWAHAIEEEMGVKVVSVYTKFGHQGDMEKGIARCGEDALAIDDPNELEGL 391

Query: 398 HFVRTLDVDIFVGGVKERPIAHKLGIGFCDHNHERKIALAGFEGMYNFAREVHASVTSPV 457
             +  L  DI   G +   +A K+ + + + +        GFEG   FAR+++  + SP+
Sbjct: 392 EALEKLQPDIIFTGKRPGEVAKKVRVPYLNAHAYHNGPYKGFEGWVRFARDIYNGIYSPM 451