Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 484 a.a., nitrogenase molybdenum-iron protein alpha chain from Herbaspirillum seropedicae SmR1

 Score =  223 bits (568), Expect = 1e-62
 Identities = 140/443 (31%), Positives = 233/443 (52%), Gaps = 26/443 (5%)

Query: 34  GQGPIDLACNRESLAGAVSQRACVFCGSRVVLY-PIADALHLVHGPVGCAAYTWDIRGAL 92
           G+   ++  N +S+ G ++ R C + GS+ V++ PI D +H+ HGPVGC  Y+W  R   
Sbjct: 41  GKSDCNVKSNIKSIPGVMTIRGCAYAGSKGVVWGPIKDMIHISHGPVGCGQYSWGSRRNY 100

Query: 93  SSGP----ELHRLSFSTDLGERDIIFGGEPKLEAALDELITRHA-PKAAFVYATCIVGLI 147
             G         + F++D  E+DI+FGG+ KLE  +DE+       K   V + C +GLI
Sbjct: 101 YIGKTGIDSFVTMQFTSDFQEKDIVFGGDKKLEKIVDEIQELFPLNKGISVQSECPIGLI 160

Query: 148 GDDIGAVCKRVAARH-GIPVLPVQSEGFKGNKRE-GYEAACAAM--FTLTGTGATDG--- 200
           GDDI AV K+ + ++ G  ++PV+ EGF+G  +  G+  A  A+  + L           
Sbjct: 161 GDDIEAVSKKKSKQYEGHTIVPVRCEGFRGVSQSLGHHVANDAIKEWVLDKMDPDKNQFV 220

Query: 201 IGPASVNILGDFNLAGELWIIRGYLERMGVQVVANITGDGRVDDLRRCHGAALNLVQCSG 260
             P  V I+GD+N+ G+ W  R  LE +G++V+A  +GDG + ++     A LN++ C  
Sbjct: 221 ATPYDVAIIGDYNIGGDAWSSRILLEEIGLRVIAQWSGDGTLAEMENTPKAKLNVLHCYR 280

Query: 261 ATMPLARMMREAYGTPTLRVSYLGIEDMADSLYNVAEHF----REVCPGIVERTRDLVRE 316
           +   ++R M E +G P +  ++ G   +  SL  +A HF    +E    ++ + + L   
Sbjct: 281 SMNYISRHMEEKFGIPWVEYNFFGPSQIEASLRQIASHFDDKIKEGAERVIAKYKALTDA 340

Query: 317 EIATLMPRLRQLRRDLEGKRAAIYVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYRE 376
            IA   PR       LEGK   ++VGG  +   +I A+  LGM+V   G + G ++DY+ 
Sbjct: 341 VIAKYRPR-------LEGKTVMLFVGG-LRPRHVIDAYGDLGMKVVGTGYEFGHNDDYQR 392

Query: 377 LEAICDPGTIIVDDANALELAHFVRTLDVDIFVGGVKERPIAHKLGIGFCD-HNHERKIA 435
                + GT+I DD  + E   FV  ++ D+   G+KE+ +  K+G+ F   H+ +    
Sbjct: 393 TTHYVEDGTLIYDDVTSYEFEKFVEKIEPDLVGSGIKEKYVFQKMGVPFRQMHSWDYSGP 452

Query: 436 LAGFEGMYNFAREVHASVTSPVW 458
             G++G   FAR++  ++ SPVW
Sbjct: 453 YHGYDGFAIFARDMDMAINSPVW 475