Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 519 a.a., nitrogenase molybdenum-iron protein beta chain from Herbaspirillum seropedicae SmR1

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 88/431 (20%), Positives = 159/431 (36%), Gaps = 56/431 (12%)

Query: 54  RACVFCGSRVVLYPIADALHLVHGPVGCAAYTWDIRGALSSGPELHRLSFSTDLGERDII 113
           +AC   G+        + L  VHG  GC AY    R   S   +      S+ + E   +
Sbjct: 68  KACQPLGAVYAAVGFQNTLPFVHGSQGCVAY---YRSHFSRHFKEPTSCVSSSMTEDAAV 124

Query: 114 FGGEPKLEAALDELITRHAPKAAFVYATCIVGLIGDDIGAVCKRVAARHGIP----VLPV 169
           FGG   +   L   ++ + P+   V  TC+  +IGDD+ +  K    +  +P    V   
Sbjct: 125 FGGLNNMIDGLANALSLYKPEMIAVSTTCMAEVIGDDLDSFIKNAKDKGSVPAEYDVPFA 184

Query: 170 QSEGFKGNKREGYEAACAAMFTLTGTGATDGIGPA-------SVNILGDFN--LAGELWI 220
            +  F G+   GY+ A   + T    G   G  PA        +N +G F+  + G L  
Sbjct: 185 HTPAFVGSHVTGYDNALKGILTHFWDGKA-GTVPALERKPNERINFIGGFDGFVVGNLPE 243

Query: 221 IRGYLERMGV--------QVVANITGDGRV---------DDLRRCHGAALNLVQCSGATM 263
           ++   + MGV          V N   DG+           ++     A   +V    +T+
Sbjct: 244 VKRIFKLMGVDGTIVCDPSEVWNTPTDGQFRMYSGGTTKQEVIEALDAKATVVFQEFSTL 303

Query: 264 PLARMMREAYGTPTLRVSY-LGIEDMADSLYNVAEHFREVCPGIVERTRDLVREEIATLM 322
             A+ + E  G   + +++ +G+      L  ++    +  P  +E  R  + + IA   
Sbjct: 304 KTAKYIAEK-GQEVVTLNHPMGVAGTDQFLMELSRLSGQPIPAELELERGRLVDAIA--- 359

Query: 323 PRLRQLRRDLEGKRAAIYVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYRELEAICD 382
                 +  L GK+ A+Y G       + +    LG +   + S  G  E   +++A+ D
Sbjct: 360 ----DSQAHLHGKKFALY-GDPDMMIGMTQFLLELGCEPTHILSTNGDAEWAAKVQALLD 414

Query: 383 PGTI-----IVDDANALELAHFVRTLDVDIFVGGVKERPIAHKLGIGFC-------DHNH 430
                    +    +   L   + T  VD  +G    + +    G+          D +H
Sbjct: 415 ASPFGKDCKVYPKRDLWHLRSLLFTEPVDFLIGNTYGKYLERDCGVPLIRLVFPVFDRHH 474

Query: 431 ERKIALAGFEG 441
             +  + G+ G
Sbjct: 475 YHRFPIWGYAG 485