Pairwise Alignments

Query, 440 a.a., conserved hypothetical protein TIGR00247 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 336 a.a., conserved hypothetical protein TIGR00247 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (466), Expect = 5e-51
 Identities = 130/350 (37%), Positives = 178/350 (50%), Gaps = 44/350 (12%)

Query: 103 LLRLLGVLCLVVLCAGGYAGYDAWRFLNVPPQTPGEETTFDVEPGASFDKVARQLEQRGL 162
           LL LL + CLV     GY GY      +  P    E     +  G S  ++A+QLE  G+
Sbjct: 12  LLALLTLACLV-----GYWGYRTIIDYSQTPLVLTEAKELTIARGTSVHQLAQQLETDGV 66

Query: 163 VSSAWRFKLLGHWMEWTGSLKAGRFAMHTGWTPGRVLDQLVNGQPILYRLTLREGLTWWE 222
           +   W+ K L         ++ G + M    T   +L+ LVNG+  ++ +TL EG T  E
Sbjct: 67  IQDKWKLKWLLKLRPELAKIRTGLYEMTPSQTLADLLNDLVNGKVKIFSVTLVEGKTIAE 126

Query: 223 VGRLLESEGFARFSD--FSAVIHDPAFLRHYGIPFDSA--EGFLFPETY----------- 267
             + L +    + +   FSAV+ D           DSA  EG  FP+TY           
Sbjct: 127 WEQQLANAPHLQLTSEVFSAVLMDQGD--------DSALPEGKFFPDTYHYTADSDAREL 178

Query: 268 LLKKPQTLNREAARSVAGRLVDTFWRSTAAVLPLGHRTPPDDLRRLVTLASIVERETGVP 327
           L +  + + +E A++         W      LPL  R       +++ LASIVE+ETG  
Sbjct: 179 LTQSYKMMEQELAKA---------WAERVPGLPLKSRY------QMLILASIVEKETGQA 223

Query: 328 AERARVAGVYTNRLRVGMILQADPTVIYGLGPTFDGNLRRSHLQDGDNPYNTYRKPGLPP 387
            ER ++AGV+ NRL +GM LQ DPTVIYG+G  F GN+ R  L + D P+NTYR  GLPP
Sbjct: 224 FERDQIAGVFINRLNLGMKLQTDPTVIYGMGDRFKGNITRKDLVE-DTPFNTYRIFGLPP 282

Query: 388 GPICSPGFEALQAAVKPEDHGYFYFVARKDGTHQFSTNLDDHNAAVRKFQ 437
            PI +P   +LQA  KP    Y YFV+R DGTH FST L++HN AV  +Q
Sbjct: 283 TPIAAPSKASLQAVSKPAKVSYLYFVSRNDGTHVFSTTLEEHNRAVDIYQ 332