Pairwise Alignments

Query, 679 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  217 bits (552), Expect = 2e-60
 Identities = 158/557 (28%), Positives = 274/557 (49%), Gaps = 65/557 (11%)

Query: 135 RDYFRKAMS-GEVAISDVFASGIDGNPIFVVAAPVRVSGRIAGVVYSAVKLQGLSEGAVS 193
           R ++++A + G+   ++ + S      +  +A PVR  G++ GV  S + L  L +  ++
Sbjct: 133 RGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLA 192

Query: 194 RVKVGKRGYAFIADAKGRVLAHPRRDLIMKLDLSTMEWGREML-------GKDAGVVRYL 246
            ++V  +GYA + + KG+++AHP +DLI+K    T E   ++         KD  + +  
Sbjct: 193 -IEVPGKGYAILVNQKGKIVAHPTQDLILK---PTEEMSAQLTISKLNIAAKDHSLFQLS 248

Query: 247 FEGQEKIVAFEREPVTRWMVGVTAEQSDIFDSIVS-IRNRSALAAGVVLLCIVGVGVFVV 305
            +G++K++  E    T W++ +  ++  +   +   +  +  +  G++L+  +    FV 
Sbjct: 249 MDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVA 308

Query: 306 RGISQALGEGVRFATDVAAGD--LSRDINLNRNDELGQLASALTTMVKRLREMIATAEQK 363
           R +++ LG       D+A GD  L+R +++   DE+G LA      V RL +M+    + 
Sbjct: 309 RQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVRE- 366

Query: 364 TSEAEAQSLAAQEATRVAEEARRQAEGARREGLLDAAGRLEGIVMRVTSASEQLAAQVEQ 423
                                                     + + +T  ++  AA   Q
Sbjct: 367 ------------------------------------------VSVALTQGADHAAASATQ 384

Query: 424 SSRGADLQRERSAEAATAMEEMTATVIEVARNASEASESADKARQQATDGAGVVLSMVEA 483
           +S+    Q++     ATA+ EM +   E+A NA   +++A ++ Q   DG      M ++
Sbjct: 385 ASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFA---QMQQS 441

Query: 484 IGTVDAQTGELRGSLGTLGE---RAEGIGQIMTVISDIADQTNLLALNAAIEAARAGDAG 540
             ++D    EL G++  + E    A  I  I++ I  IA+QTNLLALNAAIEAARAG+ G
Sbjct: 442 KQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQG 501

Query: 541 RGFAVVADEVRKLAEKTMNATREVGEAVRAIQNGTRDSIAGMEQASMSVGRSNELAGLAG 600
           RGFAVVADEVR L+++T  +T E+   +  +Q  T  +++ M ++   V  S       G
Sbjct: 502 RGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTG 561

Query: 601 AALQRIVTFVEASADQVRSIATASEEQSAASEQISRGTEEVNRIAAETADAMRQSAQAVT 660
           A+LQ I   ++  +D    IA+A+EEQS  +  I+  TE V  ++ + A+  +QS Q   
Sbjct: 562 ASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAK 621

Query: 661 ELAAMAQELQQLIERLK 677
            L AMAQEL + I R K
Sbjct: 622 SLHAMAQELNKEISRFK 638