Pairwise Alignments

Query, 321 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1211 a.a., O-antigen biosynthesis protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 63.9 bits (154), Expect = 2e-14
 Identities = 64/233 (27%), Positives = 116/233 (49%), Gaps = 27/233 (11%)

Query: 3   VTVMIPTYNQKDYVGSAIESALAQTYADLEIVVADDASPDPGVAKVLERY---RNHPKVR 59
           VTV +P Y +  ++ +A++S LAQ   DLE+++ DD  P   VA+V++ +    +  ++R
Sbjct: 26  VTVAVPAY-RATFLKTALDSVLAQDMHDLELLICDDC-PTDAVAEVVKNFLDSEHGAQIR 83

Query: 60  LYRNAQNLGRVANYRKTLYERARGEWVINLDGDDYLVDPCFVEDAVGVVKKHPDIVAVLG 119
             RN Q L  V N+ + +  +ARG ++  L  DD L+  C    A  V+ +HP++  V  
Sbjct: 84  YLRNPQPLLEVGNFGRCI-AQARGTYLKFLCDDDVLLPGCLTAMA-DVLDRHPEVALVSS 141

Query: 120 GRK-------VLQASGTHKVQ-QANVCLSGRVAPRDVFSGILDGTL-FPYHNATLYSRT- 169
            R+       +L  SG + +  + +VC+ G    +++ S + + TL F    +T+  RT 
Sbjct: 142 RRQLIDERGALLPESGANAIPFEGDVCVHG----QELVSFLAERTLNFIGEPSTVMFRTA 197

Query: 170 ----HALAIGFYEQDIVS--SDLESFLRLFARGAVGVLPRIVGVWREHSGNTS 216
               HA A    +   +    DL  ++ L  +G + +L   +  +R  +G  S
Sbjct: 198 QMRPHADAPFSLQGRRIQWLGDLTMYVNLLRKGHLAMLQSPLSCFRISAGQVS 250