Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 482 a.a., Nitrogenase MoFe cofactor biosynthesis protein NifE (NCBI) from Rhodospirillum rubrum S1H

 Score =  238 bits (607), Expect = 4e-67
 Identities = 152/477 (31%), Positives = 244/477 (51%), Gaps = 62/477 (12%)

Query: 64  GCCYAGCKGVVIGPYGDMVHIVHGPVGCSFYAWLTRRNQFRARGEAGKNYLSYCFTTDMQ 123
           GC + G K + + P  D+VH+VHGP+ C   +W TR       G +G     + FTTD+ 
Sbjct: 43  GCAFDGAK-IALQPVTDVVHLVHGPIACEGNSWDTRNV-----GTSGPLIYRWGFTTDLS 96

Query: 124 DEDIIFGGEKKLAQAIREAAAIFRPEAISVHATCPVGLIGDDIQAVARELSKETGIPVMA 183
           + D+I GGEKKL +AI+EA A + P AI V+ TC   LIGDDI  V +  S+  G+PV+ 
Sbjct: 97  EMDVIHGGEKKLYRAIKEAVAKYAPPAIFVYQTCVPALIGDDIDQVCKVASERLGLPVVP 156

Query: 184 FNCEGYKGVSQSAGHHIANNKIFDMALGTRE-REAGRFSVNVLGEYNIGGDAYEIERVLE 242
            N  G+ G S++ G+ +    +    +GT E  +AG   +N++GEYN+ G+   ++ + +
Sbjct: 157 VNAPGFVG-SKNLGNKLGAEALLAHVIGTIEPSDAGPTDINIIGEYNVAGEFALVKPLFD 215

Query: 243 KCGIEVVATFSGNSVYEDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNFIGMR 302
           + GI + A  +GNS Y D+  AH+A +N+++C +++  L   M  ++GIP+ + +F G+ 
Sbjct: 216 ELGIRIRACITGNSRYRDLAGAHTARVNMMVCSQAMINLGRGMRERWGIPYFEGSFYGIG 275

Query: 303 SMSQSLRKIARYFDD----AALTARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGS 358
             SQ+LR IA    +    A L AR E++IA EEA+A  A+AAY P L GK  +L+ GG 
Sbjct: 276 DTSQTLRTIATLLVERGATADLIARTEALIAREEAKAWAAMAAYRPRLAGKRVLLYTGGV 335

Query: 359 RAHHYMHLMRDLGMEPLVAGFEFAHRDDYEGRRVIPTIRVDADSKNIEEL-KVTADPERY 417
           ++   +H ++++GME +      +  DD    R      +D ++  + EL    A+PE Y
Sbjct: 336 KSWSVVHALQEMGMEVVGTSVRKSTEDDKARARA----ALDQNTGKVGELFGAIANPEMY 391

Query: 418 RPRLDPAYREQLEREGLLSSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIICSGIK 477
           R          + R+G                                    DI+ SG +
Sbjct: 392 R----------MFRDG----------------------------------EADIMLSGGR 407

Query: 478 DKYVIEKFGVPCKQLHNYDYSGPYAGYEGAVNFARDVYAMIHSPAWKLTRSPFDTGP 534
            ++V  K       ++   + G YAGY+G +   R +   I++P W   R+P    P
Sbjct: 408 SQFVALKARTAWMDINQERHHG-YAGYDGMLELVRQMDIEINNPVWAQVRAPAPWDP 463