Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 519 a.a., nitrogenase iron-iron protein, alpha chain (NCBI) from Rhodospirillum rubrum S1H

 Score =  258 bits (660), Expect = 3e-73
 Identities = 165/518 (31%), Positives = 257/518 (49%), Gaps = 75/518 (14%)

Query: 30  KRRAHMVVRKDGDPGLAQQIEAN-TRTVPGIITQRGCCYAGCKGVVIGPYGDMVHIVHGP 88
           +R  H V+ K  D  L   +      T+PG I++RGC Y G K V+  P  D++HI HGP
Sbjct: 14  ERTKHAVI-KGADEDLTSCLPLGYLNTIPGSISERGCAYCGAKHVIGQPMKDVIHISHGP 72

Query: 89  VGCSFYAWLTRR-----NQFRARGEAGKNYLSYCFTTDMQDEDIIFGGEKKLAQAIREAA 143
           +GC++  W T+R     N F+         L Y + TD++++ I+FG EK L Q I EA 
Sbjct: 73  IGCTYDTWQTKRYISDNNNFQ---------LKYTYATDVREKHIVFGAEKLLKQNILEAF 123

Query: 144 AIFRP-EAISVHATCPVGLIGDDIQAVARELSKET-GIPVMAFNCEGYKGVSQSAGHHIA 201
             F   + ++++ TC   LIGDDI A+A E+  E   + +   N  G+ G SQS GHH  
Sbjct: 124 KAFPDIKRMTIYQTCATALIGDDIDAIASEVMDELPDVDIFVCNSPGFAGPSQSGGHHKI 183

Query: 202 NNKIFDMALGTRERE-AGRFSVNVLGEYNIGGDAYEIERVLEKCGIEVVATFSGNSVYED 260
           N    +  +GT E E    + +N +GEYNI GD   ++    + GI++++TF+GN  Y+ 
Sbjct: 184 NIAWVNQKVGTVEPEITSDYVINYVGEYNIQGDQEVMQDYFNRMGIQILSTFTGNGSYDG 243

Query: 261 MCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNFIGMRSMSQSLRKIARYFDDAAL 320
           +   H A+LN++ C RS  Y+   +  ++GIP + ++  G   +S SLRKI  +F    +
Sbjct: 244 LRAMHRAHLNVLECARSAEYICNELRVRYGIPRLDIDGFGFEPLSDSLRKIGLFF---GI 300

Query: 321 TARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMHLMR-DLGMEPLVAGF 379
             R +++I EE A+ +  L  Y   L GK   L+ GGS+  H+ H+++ ++G+  +    
Sbjct: 301 EDRAQAIIDEETAKWKPQLDWYKERLRGKKVCLWPGGSKLWHWAHVIQEEMGLNVVSLYT 360

Query: 380 EFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYREQLEREGLLSSYE 439
           +F H+ D E                                           +G+    E
Sbjct: 361 KFGHQGDME-------------------------------------------KGIARCGE 377

Query: 440 GMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVIEKFGVPCKQLHNYDYSG 499
           G         L IDD + +E  + +  + PDII +G +   V +K  VP    H Y ++G
Sbjct: 378 G--------ALAIDDPNELEGLEALEMLKPDIILTGKRPGEVAKKVRVPYLNAHAY-HNG 428

Query: 500 PYAGYEGAVNFARDVYAMIHSPAWKLTRSPFDTGPTLT 537
           PY GYEG V FARD+Y  I+SP ++L+       P  T
Sbjct: 429 PYKGYEGWVRFARDIYNAIYSPIFQLSALDISKDPIPT 466