Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 511 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  120 bits (302), Expect = 9e-32
 Identities = 119/473 (25%), Positives = 194/473 (41%), Gaps = 80/473 (16%)

Query: 82  VHIVHGPVGCSFYAWLTR---RNQFRARGEAGKNYLSYCFTTDMQDEDIIFGGEKKLAQA 138
           V + H P+GC     +     RN    RG   +N   +  +T++++ D+++GG  KL + 
Sbjct: 82  VLVQHSPIGCGAGQVIYNSIFRNGLAIRGLPVENL--HLISTNLRERDMVYGGLDKLERT 139

Query: 139 IREAAAIFRPEAISVHATCPVGLIGDDIQAVARELSKETGIPVMAFNCEGYKGVSQSAGH 198
           IR+A     P+AI +  +CP  +IGDDI++VA +L  E GIPV+  +CEG+K    S G 
Sbjct: 140 IRDAWERHHPQAIFIATSCPTAIIGDDIESVASQLEAEFGIPVIPLHCEGFKSKHWSTGF 199

Query: 199 HIANNKIFDMALGTREREAGRFSVNVLGEYNIGGDAYEIERVLEKCGIEVVATFSGNSVY 258
               + I    +           VNV+  +  G D +    +L + G+ V       +V 
Sbjct: 200 DATQHGILRQIVRKNPERKQEDLVNVINLW--GSDVF--GPMLGELGLRVNYVVDLATV- 254

Query: 259 EDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNF-IGMRSMSQSLRKIARYFDD 317
           ED+     A   +  C+    Y+A  +E +FG+P +K     G       LR+IAR    
Sbjct: 255 EDLAQMSEAAATVGFCYTLSTYMAAALEQEFGVPEVKAPMPYGFAGTDAWLREIARV--- 311

Query: 318 AALTARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMHLMRDLGMEPLVA 377
                + E+ IA E AR +  L A    L+G    +  G + AH  + ++R+LG+  +  
Sbjct: 312 THREEQAEAYIAREHARVKPQLEALREKLKGIKGFVSTGSAYAHGMIQVLRELGV-TVDG 370

Query: 378 GFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYREQLEREGLLSS 437
              F H                                      DP Y  Q  R+  L+ 
Sbjct: 371 SLVFHH--------------------------------------DPVYDSQDPRQDSLAH 392

Query: 438 YEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIIC---SGIKDKYVIEKFGVPCKQLHN 494
               + D+G     + +    +   L+ R+ PD I    +G+    +  + G+P   L +
Sbjct: 393 LVDNYGDVGH--FSVGNRQQFQFYGLLQRVKPDFIIIRHNGLAP--LASRLGIPAIPLGD 448

Query: 495 YDYSGPYAGYEGAVN-------------FARDVYAMIHSP---AWKLTRSPFD 531
              +    GY+G +N             F  D+ A +  P    W L R PFD
Sbjct: 449 EHIA---VGYQGILNLGESILDVLAHRKFHEDIAAHVRLPYRQDW-LARDPFD 497