Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 487 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  117 bits (292), Expect = 1e-30
 Identities = 132/526 (25%), Positives = 215/526 (40%), Gaps = 77/526 (14%)

Query: 25  PKVAKKRRAHMVVRKDGDPG--LAQQIEANTRTVPGIITQRGCCYAGCKGVVIGPYGDMV 82
           P   ++RR   +    G  G  +A+  + +         Q   C   C  + +    D V
Sbjct: 10  PVEIRERRLGSITGYSGTAGDLVARSRDGSLANRERSFQQASMCAGLCATLNLTLIEDAV 69

Query: 83  HIVHGPVGCSFYAWLTRRNQFRARGEAGKNYLSYC----FTTDMQDEDIIFGGEKKLAQA 138
            I H PVGC+      + N+ R RG+ GK  +        +T + + D IFGG +KLA+ 
Sbjct: 70  VINHAPVGCA--GDFAQLNRCRRRGQ-GKRAMEVTNARLLSTALTEHDTIFGGAQKLAET 126

Query: 139 IREAAAIFRPEAISVHATCPVGLIGDDIQAVARELSKETGIPVMAFNCEGYKGVSQSAGH 198
           I +A A + P AI V A+C  G++G+DI +V  E  +   IPV+A +C G++    + G 
Sbjct: 127 IDQAVARYHPRAIFVTASCASGIVGEDIDSVVTEAEERHAIPVVAIDCVGFRTQVWATGF 186

Query: 199 HIANNKIFDMALGTREREAGRFSVNVLGEYNIGGDAYEIERVLEKCGIEVVATFSGNSVY 258
            +A    +D  L    + A      V+      G       +LE  G+         +V 
Sbjct: 187 DMA----YDALLRKIVKPAVTKRPEVVNIVCFSGKKAYFSELLEPLGLVANPIVQFLTVA 242

Query: 259 EDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKV-NFIGMRSMSQSLRKIARYFDD 317
           E + T   A     MC     +L   +E +FG+P +K     G+      LR +      
Sbjct: 243 E-IETLSEAGATAHMCPTLGTWLGAGLERRFGVPEVKAPPPYGLAGTDHWLRAL------ 295

Query: 318 AALTA---RIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMHLMRDLGMEP 374
           AALT    R+E+ IA E A     LA     L G+TA +  G ++ H +M ++RDLG++ 
Sbjct: 296 AALTGRSDRVEAYIAAERAAIAPDLADLRAQLAGRTAFVAAGSAQGHSFMTVLRDLGID- 354

Query: 375 LVAGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYREQLEREGL 434
            V G    H D                                 P LD  ++E+      
Sbjct: 355 -VIGGCALHHD---------------------------------PVLDHGHQEE------ 374

Query: 435 LSSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVI---EKFGVPCKQ 491
             +      D  E    + +    E+  L+ ++ PDI+   I+   ++    K G+P   
Sbjct: 375 -DTLAHATRDKAEVPYGVCNKQSFELINLVGKLKPDILL--IRHPGLVVWGAKLGIPTLY 431

Query: 492 LHNYDYSGPYAGYEGAVNFARDVYAMIHSPAWKLT---RSPFDTGP 534
           + + +++G   GY G + + R +   I +P  + T   RSP    P
Sbjct: 432 VED-EHAG--IGYRGLIRYGRKIADWIANPVLERTLARRSPLPFTP 474