Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 487 a.a., nitrogenase molybdenum-iron protein alpha chain from Rhodopseudomonas palustris CGA009

 Score =  383 bits (983), Expect = e-110
 Identities = 212/527 (40%), Positives = 309/527 (58%), Gaps = 66/527 (12%)

Query: 13  ESFVDEVTSLYPPKVAKKRRAHMVVRKDGDPGLAQ-QIEANTRTVPGIITQRGCCYAGCK 71
           +  + EV   YP K AK+R  H+      D   A+  +++N +++PG++T RGC YAG K
Sbjct: 17  KKLIGEVLEAYPDKSAKRRAKHL---NTYDAEKAECSVKSNIKSIPGVMTIRGCAYAGSK 73

Query: 72  GVVIGPYGDMVHIVHGPVGCSFYAWLTRRNQFRARGEAGKN-YLSYCFTTDMQDEDIIFG 130
           GVV GP  DMVHI HGPVGC  Y+W +RRN ++  G  G + + +  FT+D Q++DI+FG
Sbjct: 74  GVVWGPIKDMVHISHGPVGCGQYSWGSRRNYYK--GTTGVDTFGTMQFTSDFQEKDIVFG 131

Query: 131 GEKKLAQAIREAAAIFR-PEAISVHATCPVGLIGDDIQAVARELSKE-TGIPVMAFNCEG 188
           G+KKL + I E   +F   + ISV + CP+GLIGDDI+AV++  SK+  G P++   CEG
Sbjct: 132 GDKKLGKIIDEIQELFPLSKGISVQSECPIGLIGDDIEAVSKAKSKQYDGKPIIPVRCEG 191

Query: 189 YKGVSQSAGHHIANNKIFDMALGTR-EREAG----RFSVNVLGEYNIGGDAYEIERVLEK 243
           ++GVSQS GHHIAN+ I D       E+ AG     + V ++G+YNIGGDA+    +LE+
Sbjct: 192 FRGVSQSLGHHIANDVIRDWVFDKAGEKNAGFQSTPYDVAIIGDYNIGGDAWASRILLEE 251

Query: 244 CGIEVVATFSGNSVYEDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNFIGMRS 303
            G+ V+A +SG+    ++     A LN++ C+RS+NY+   ME KFGIPW++ NF G   
Sbjct: 252 MGLRVIAQWSGDGTIAELENTPKAKLNILHCYRSMNYITRHMEEKFGIPWVEYNFFGPTK 311

Query: 304 MSQSLRKIARYFDDAALTARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHY 363
           +  SLR+IA  FDD  +    E VIA+ + + E  +A Y P LEGK  ML+VGG R  H 
Sbjct: 312 IEASLREIASKFDD-KIKEGAERVIAKYKPQMEAVIAKYRPRLEGKKVMLYVGGLRPRHV 370

Query: 364 MHLMRDLGMEPLVAGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDP 423
           +    DLGME +  G+EF H DDY+                                   
Sbjct: 371 IGAYEDLGMEVVGTGYEFGHNDDYQ----------------------------------- 395

Query: 424 AYREQLEREGLLSSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVIE 483
                  ++G L     ++DD          V+  E EK + ++ PD++ SG+K+KY+ +
Sbjct: 396 -RTTHYVKDGTL-----IYDD----------VTGYEFEKFVEKVRPDLVGSGVKEKYIFQ 439

Query: 484 KFGVPCKQLHNYDYSGPYAGYEGAVNFARDVYAMIHSPAWKLTRSPF 530
           K GVP +Q+H++DYSGPY GY+G   FARD+   I++P WKLT++P+
Sbjct: 440 KMGVPFRQMHSWDYSGPYHGYDGFGIFARDMDIAINAPVWKLTKAPW 486