Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 459 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 29/290 (10%)

Query: 57  PGIITQ--RGCCYAGCKGVVIGPYGDMVHIVHGPVGCS---FYAWLTRRNQFRARGEAGK 111
           PG I Q   GC       V+  P    + I H   GC+   F+A L+  N +    + G+
Sbjct: 19  PGAIEQVRYGCSLGALASVIAIP--GAIPITHCGPGCATKQFHA-LSGINAY----QGGE 71

Query: 112 NYLSYCFTTDMQDEDIIFGGEKKLAQAIREAAAIFRPEAISVHATCPVGLIGDDIQAVAR 171
            ++    +T++ ++++IFGG  +L + I     +   +   V   C  GL+GDD+ +V R
Sbjct: 72  FHVP---STNLGNQEVIFGGADRLDELIASTLKVMEADLFVVQTGCIPGLVGDDVGSVVR 128

Query: 172 ELSKETGIPVMAFNCEGYKGVSQSAGHHIANNKIFDMAL--GTREREAGRFSVNVLGEYN 229
           +  K  G+P++     GY+G +   GH      I D  +  G    + G  +V  L  Y 
Sbjct: 129 KYQKR-GVPIVVAETSGYRG-NNFTGHETVIRAIIDQFVDAGDAPLQHGLVNVWSLLPYQ 186

Query: 230 ---IGGDAYEIERVLEKCGIEVVATFSGNSV-YEDMCTAHSANLNLVMCHRSINYLAEMM 285
                GD  EI R+LE  G++V   F   S    +      A  NLV+        A+ +
Sbjct: 187 NPFWRGDLSEIRRILEGIGLQVNILFGPASAGVAEWRAIPRAQFNLVLSPWLGLSTAQHL 246

Query: 286 ETKFGIPWMKVNF--IGMRSMSQSLRKIARYFDDAAL-TARIESVIAEEE 332
           E  +G P++      IG ++ S  LR++  +   A L  AR E+ IA+EE
Sbjct: 247 EELYGQPFLHEPTIPIGAKATSAFLRRVVEF---AGLDRARAEAFIAQEE 293