Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 501 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score =  123 bits (309), Expect = 1e-32
 Identities = 114/445 (25%), Positives = 186/445 (41%), Gaps = 62/445 (13%)

Query: 80  DMVHIVHGPVGCSFYAWLTRR---NQFRARGEAGKNYLSYCFTTDMQDEDIIFGGEKKLA 136
           D V + H P+GC+     T R   +    RG   ++  S C  T++ ++D++FGG  +L 
Sbjct: 78  DSVVVQHSPIGCAASQSFTARYYRDLAARRGWKLEDPKSIC--TNLGEQDMVFGGVARLE 135

Query: 137 QAIREAAAIFRPEAISVHATCPVGLIGDDIQAVARELSKETGIPVMAFNCEGYKGVSQSA 196
             IR+A    +P  I V  +C  G+IGDD+   A+ +  E GIPV+  +CEG+K    S+
Sbjct: 136 DTIRDAYERHKPRVIFVATSCATGIIGDDVDGAAKRVEDEIGIPVVTLHCEGFKSKHWSS 195

Query: 197 GHHIANNKIFDMALGTREREAGRFSVNVLGEYNIGGDAYEIERVLEKCGIEVVATFSGNS 256
           G  +  + I    L     E  R   +++   ++GG       +L   G+ V     GN+
Sbjct: 196 GWDVIEHGI----LRRLVPEPPRKQPDLINVIHLGGPDV-FSPLLNPLGLRVNLVMGGNT 250

Query: 257 VYEDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNF-IGMRSMSQSLRKIARYF 315
           + E +     A   + MC   ++YLA  +E +FG+P ++     G+ +    LR IAR  
Sbjct: 251 L-ERLAQMSEAAATVTMCF-VLSYLATGLEQQFGVPEVRAPLPYGLDATDNWLRDIARL- 307

Query: 316 DDAALTARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMHLMRDLGMEPL 375
                + ++E+VIA E AR    LA     L GK   +  G + AH  +  +R+LG+  +
Sbjct: 308 --TGTSDKVEAVIASERARVAPGLARLRKALTGKRGFVAAGAAFAHGLLADLRELGV-TV 364

Query: 376 VAGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYREQLEREGLL 435
              F F H                                      DP       ++  L
Sbjct: 365 DDAFSFHH--------------------------------------DPTTDSGDPQQDSL 386

Query: 436 SSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPD-IICSGIKDKYVIE-KFGVPCKQLH 493
                 W D+   T+  D   H +    + R  PD +IC       V+  + G+P   + 
Sbjct: 387 GHLVDAWGDIPNYTVSPD--QHFQAHAALLRAKPDFVICRHTGTLAVLAGRMGIPVLPIF 444

Query: 494 NYDYSGPYAGYEGAVNFARDVYAMI 518
              YS    GYEG +   R +  ++
Sbjct: 445 ---YSNDGLGYEGLLTIGRAILRVL 466