Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 540 a.a., ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B from Rhodopseudomonas palustris CGA009

 Score = 54.3 bits (129), Expect = 1e-11
 Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 31/269 (11%)

Query: 61  TQRGCCYAGCKGVVIGPYGDMVHIVHGPVGCSF----YAWLTRRNQFRARGEAGKNYLSY 116
           T  G  + G   V  G    + +++H P G ++    +  + RRN+        +  ++Y
Sbjct: 7   TYEGPPHVGAMRVATG-MEKLHYVLHAPQGDTYADLLFTMIERRNK--------RPPVTY 57

Query: 117 CFTTDMQDEDIIFGGEKKLAQAIREAAAIFRPEAISVHATCPVGLIGDDIQAVARELSKE 176
              T     D+     +    A R A A F+P+A+ V A+C   LI DD   +A+ L   
Sbjct: 58  ---TTFAARDLGKDTAELFMSAARNAYARFKPQAMIVGASCTGSLIQDDPGGLAKSLG-- 112

Query: 177 TGIPVMAFNCEGYK-----GVSQS---AGHHIANNKIFDMALGTREREAG-RFSVNVLGE 227
             IPV+  +   Y+     G S++       IA  K         ER AG R   N+LG 
Sbjct: 113 FSIPVIPIDLPAYQRKENWGASETFYQLVRAIAGPKAPAPGTKRPERAAGQRAKCNLLGP 172

Query: 228 YNIG----GDAYEIERVLEKCGIEVVATFSGNSVYEDMCTAHSANLNLVMCHRSINYLAE 283
             +G     D  EI R+L + GI+V       +   D+     A+ N+V+     +  A 
Sbjct: 173 TALGFRHRDDITEITRLLGQLGIDVNVVAPMGATPADLTRLGEADFNVVLYPEVASQAAS 232

Query: 284 MMETKFGIPWMKVNFIGMRSMSQSLRKIA 312
            ++  F  P+ K   IG+ +  + +R++A
Sbjct: 233 WLQRIFHQPFTKTIPIGVSATREFVREVA 261



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 9/69 (13%)

Query: 446 GEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVIEKFGVPC----KQLHNYDYSGPY 501
           G   L+ DD  ++E+E  +  ++P+++     ++++ ++ GVPC      +H  D+   Y
Sbjct: 342 GVEALITDD--YLEVEAKVAELHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARY 399

Query: 502 A---GYEGA 507
           A   G+EGA
Sbjct: 400 APQMGFEGA 408