Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 522 a.a., nitrogenase iron-iron protein, alpha chain from Rhodopseudomonas palustris CGA009

 Score =  251 bits (642), Expect = 4e-71
 Identities = 169/510 (33%), Positives = 255/510 (50%), Gaps = 73/510 (14%)

Query: 26  KVAKKRRAHMVVRKDGDPGLAQQIEANTRTVPGIITQRGCCYAGCKGVVIGPYGDMVHIV 85
           K   +R+ H V +  GD            T+PG I++RGC Y G K V+  P  D++H+ 
Sbjct: 10  KCLPERQKHAVTKGAGDNLATALPLGYLNTIPGSISERGCAYCGAKHVIGTPMKDVIHMS 69

Query: 86  HGPVGCSFYAWLTRR-----NQFRARGEAGKNYLSYCFTTDMQDEDIIFGGEKKLAQAIR 140
           HGPVGC++  W T+R     N F+         L Y F TD++++ I+FG E  L Q I 
Sbjct: 70  HGPVGCTYDTWQTKRYISDNNNFQ---------LKYTFATDVREKHIVFGAEGLLKQNII 120

Query: 141 EA-AAIFRPEAISVHATCPVGLIGDDIQAVARELSKET-GIPVMAFNCEGYKGVSQSAGH 198
           EA  A    + ++++ TC   LIGDDI AVA E+ +E   + +   N  G+ G SQS GH
Sbjct: 121 EAFKACPDIKRMTIYQTCATALIGDDINAVAAEVMEEMPDVDIFTCNSPGFGGPSQSGGH 180

Query: 199 HIANNKIFDMALGTRERE-AGRFSVNVLGEYNIGGDAYEIERVLEKCGIEVVATFSGNSV 257
           H  N    +  +GT E E    + +N +GEYNI GD   +     + GI+V++TF+GN  
Sbjct: 181 HKINIAWINDKVGTVEPEITSDYVINYVGEYNIQGDQEVMLDYFTRMGIQVLSTFTGNGT 240

Query: 258 YEDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNFIGMRSMSQSLRKIARYFDD 317
           Y+ +   H A+LN++ C RS  Y+   +  ++GIP + ++  G   +SQSLRKI  +F  
Sbjct: 241 YDGLRAMHRAHLNVLECARSAEYICNELRVRYGIPRLDIDGFGFEPLSQSLRKIGMFF-- 298

Query: 318 AALTARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMH-LMRDLGMEPLV 376
             +  R E++IAEE AR +  L  Y   L+GK   L+ GGS+  H+ H +  ++G++ + 
Sbjct: 299 -GIEDRAEAIIAEETARWKPELDWYKERLKGKKVCLWPGGSKLWHWAHAIEEEMGVKVVS 357

Query: 377 AGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYREQLEREGLLS 436
              +F H+ D E        R   D+  I+      DP               E EGL  
Sbjct: 358 VYTKFGHQGDMEK----GIARCGEDALAID------DPN--------------ELEGL-- 391

Query: 437 SYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVIEKFGVPCKQLHNYD 496
                                    + + ++ PDII +G +   V +K  VP    H Y 
Sbjct: 392 -------------------------EALEKLQPDIIFTGKRPGEVAKKVRVPYLNAHAY- 425

Query: 497 YSGPYAGYEGAVNFARDVYAMIHSPAWKLT 526
           ++GPY G+EG V FARD+Y  I+SP  +L+
Sbjct: 426 HNGPYKGFEGWVRFARDIYNGIYSPMHQLS 455