Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 461 a.a., Fe-only nitrogenase subunit beta from Rhodopseudomonas palustris CGA009

 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 50/274 (18%), Positives = 106/274 (38%), Gaps = 40/274 (14%)

Query: 65  CCYAGCKGVVIGPYGDMVHIVHGPVGCSFYAWLTRRNQFRARGEAGKNYLSYCFTTDMQD 124
           C  AG +   IG   D + IVHG  GC  +  L      +   E          ++ + +
Sbjct: 20  CQPAGAQYASIG-IKDCIGIVHGGQGCVMFVRLLISQHLKESFEIA--------SSSVHE 70

Query: 125 EDIIFGGEKKLAQAIREAAAIF-RPEAISVHATCPVGLIGDDIQAVARELSKE------- 176
           +  +FG   ++ +A+      +   + + +  TC   +IGDD+  V  +L +E       
Sbjct: 71  DGAVFGALDRVEEAVDVLLMRYPHVKVVPIITTCSTEVIGDDVDGVVTKLQEELLDVKYP 130

Query: 177 -TGIPVMAFNCEGYKGVSQSAGHHIANNKIFDMALGTREREAGRFSVNVLGEYNIGGDAY 235
              + ++  +C  + G S   G+ +A   + D      +++     +N++  +   GD  
Sbjct: 131 DREVHLIPIHCPSFVG-SMVTGYDVA---VRDFVKHFSKKDKPSLKINLITGWVNPGDVK 186

Query: 236 EIERVLEKCGIEVVATFS-----------------GNSVYEDMCTAHSANLNLVMCHRSI 278
           E++ +L +  +E    F                  G++   D+     A   + +     
Sbjct: 187 ELKHLLAEMQVEANVLFEIESFDSPLMPDKSAVSHGSTTIADLTATADAQGTIALNRYEG 246

Query: 279 NYLAEMMETKFGIP-WMKVNFIGMRSMSQSLRKI 311
              A  ++T++ +P  +    IG+R+    LR +
Sbjct: 247 GLAATWLQTRWDVPAVIGPTPIGIRNTDTFLRNV 280