Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 472 a.a., nitrogenase vanadium-iron protein, alpha chain from Rhodopseudomonas palustris CGA009

 Score =  267 bits (683), Expect = 6e-76
 Identities = 155/500 (31%), Positives = 264/500 (52%), Gaps = 63/500 (12%)

Query: 30  KRRAHMVVRKDGDPGLAQQIEANTRTVPGIITQRGCCYAGCKGVVIGPYGDMVHIVHGPV 89
           +R  H+ ++ DG+        +N  T+PG +++RGC + G K V+ G   D + ++HGP+
Sbjct: 14  EREKHIYLKVDGEDTRDYLPVSNAPTIPGTLSERGCAFCGAKLVIGGVLKDTIQMIHGPI 73

Query: 90  GCSFYAWLTRRNQFRARGEAGKNYLSYCFTTDMQDEDIIFGGEKKLAQAIREAA-AIFRP 148
           GC++  W T+R       + G   + Y ++TDM++  I+FGG+K+L ++I EA   +   
Sbjct: 74  GCAYDTWHTKRYP----SDNGHFQMKYVWSTDMKESHIVFGGDKRLEKSIHEAFDEMPHI 129

Query: 149 EAISVHATCPVGLIGDDIQA-VARELSKETGIPVMAFNCEGYKGVSQSAGHHIANNKIFD 207
           + + V+ TCP  LIGDDI+A V R +     + +    C G+ GVSQS GHH+ N    +
Sbjct: 130 KRMIVYTTCPTALIGDDIKATVKRVMEVRPDVDIFTCECPGFAGVSQSKGHHVLNIGWVN 189

Query: 208 MALGTRERE-AGRFSVNVLGEYNIGGDAYEIERVLEKCGIEVVATFSGNSVYEDMCTAHS 266
             +GT E E    +++N +G+YNI GD   +++  +K GI+V+A F+GN+ Y+D+   H 
Sbjct: 190 EKVGTVEPEITSPYTINFIGDYNIQGDTQLLQQYWDKLGIQVIAHFTGNANYDDLRAMHR 249

Query: 267 ANLNLVMCHRSINYLAEMMETKFGIPWMKVNFIGMRSMSQSLRKIARYFDDAALTARIES 326
           A LN+V C RS  Y+A  ++ ++GIP + ++  G   M++ +RK+  +F    +  + E+
Sbjct: 250 AQLNVVNCARSAGYIANELKKRYGIPRLDIDSWGFNYMAEGIRKVCAFF---GIEEKGEA 306

Query: 327 VIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMHLMR-DLGMEPLVAGFEFAHRD 385
           +IAEE A+ +  L  Y   L+G    ++ GG R  H+   +  DLG++ +    +F H++
Sbjct: 307 LIAEEYAKWKPQLDWYKERLKGTKMAIWTGGPRLWHWTKSVEDDLGVQVVAMSSKFGHQE 366

Query: 386 DYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYREQLEREGLLSSYEGMWDDM 445
           D+E                    KV A  +                              
Sbjct: 367 DFE--------------------KVIARGQ------------------------------ 376

Query: 446 GEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVIEKFGVPCKQLHNYDYSGPYAGYE 505
             GT  +DD + +E  ++I  + PD+I +G +   +++K  +P    H Y ++GPY G+E
Sbjct: 377 -SGTYYVDDGNELEFFEIIDLVKPDVIFTGPRVGELVKKLHIPYVNGHAY-HNGPYMGFE 434

Query: 506 GAVNFARDVYAMIHSPAWKL 525
           G VN ARD+Y  +H+P  KL
Sbjct: 435 GFVNLARDMYNAVHNPLLKL 454