Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 460 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Rhodopseudomonas palustris CGA009

 Score =  228 bits (582), Expect = 3e-64
 Identities = 144/473 (30%), Positives = 235/473 (49%), Gaps = 69/473 (14%)

Query: 61  TQRGCCYAGCKGVVIGPYGDMVHIVHGPVGCSFYAWLTRRNQFRARGEAGKNYLSYCFTT 120
           TQ GCCY G +  ++ P  D  HIVHGP+GC+  +W  R ++      +G +      TT
Sbjct: 33  TQGGCCYDGARNALL-PIADAAHIVHGPIGCAGSSWDNRGSR-----SSGSDLYRIGMTT 86

Query: 121 DMQDEDIIFG-GEKKLAQAIREAAAIFRPEAISVHATCPVGLIGDDIQAVARELSKETGI 179
           D+ D D+I G GEK+L  AIR     ++P A+ V+ TC   L GDD+ +VA+  S+  G+
Sbjct: 87  DLSDMDVIMGRGEKRLYGAIRYIIERYKPAAVFVYVTCIPALQGDDVDSVAKTASERFGL 146

Query: 180 PVMAFNCEGYKGVSQSAGHHIANNKIFDMALGTREREAGRFS---------VNVLGEYNI 230
           PV+  +C G+ G +++ G+ IA + +    +GTRE +    S         VN++GE+N+
Sbjct: 147 PVIPIDCAGFYG-NKNLGNRIAGDAMVRHVIGTREPDPLPASAAFDGTVHDVNLIGEWNV 205

Query: 231 GGDAYEIERVLEKCGIEVVATFSGNSVYEDMCTAHSANLNLVMCHRSINYLAEMMETKFG 290
           GG+ + +  + ++ G+ ++ +FSG+S + ++ T H A  N+V+C +++ ++A  +   FG
Sbjct: 206 GGEFWNVAPLFDELGLRILCSFSGDSRFREVQTMHRARANMVVCSKAMIHVARKLHESFG 265

Query: 291 IPWMKVNFIGMRSMSQSLRKIARYFDDAALTARIESVIAEEEARAETALAAYMPGLEGKT 350
            P+ + +F G+R  S + R  AR   D  L AR E +IA EEAR    LAA  P + GK 
Sbjct: 266 APYFEGSFYGVRDTSDAFRNFARLLGDPDLAARTEVLIAREEARTAAELAAIRPRVAGKR 325

Query: 351 AMLFVGGSRAHHYMHLMRDLGMEPLVAGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKV 410
            ++F GG ++   +  M+DLG+E +  G E                      K+ EE   
Sbjct: 326 VLVFAGGYKSWSLVSAMQDLGVEVVATGTE----------------------KSTEE--- 360

Query: 411 TADPERYRPRLDPAYREQLEREGLLSSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPD 470
             D  R R                        D MG    +I+D     +    H    D
Sbjct: 361 --DKARIR------------------------DLMGTQARMIEDNDQRALITAFHDCRAD 394

Query: 471 IICSGIKDKYVIEKFGVPCKQLHNYDYSGPYAGYEGAVNFARDVYAMIHSPAW 523
           ++ +G +  +   K  +P   + +    G YAGY G +  AR++ A+ +SP W
Sbjct: 395 VLVAGDRYIFPAMKSRLPFLDIDHVRRIG-YAGYSGILELARNLDAVANSPVW 446