Pairwise Alignments

Query, 283 a.a., polysaccharide deacetylase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 294 a.a., polysaccharide deacetylase from Pseudomonas fluorescens FW300-N2C3

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 36  RNTNHVLDLLDRWGLRATFFTLGWVAKRHPELVRRMASAGHEVACHGYSHKRITTLNPRA 95
           R    +L L    G+ +++F  G VA+ +P L++ +   GHE+AC GY H+    L+  A
Sbjct: 50  RGVARLLGLFKELGVCSSWFVPGIVAEENPGLIQAIQGDGHEIACAGYRHQDYDALDLIA 109

Query: 96  FRDDIQRSRRLLQDLSGQPVNGYRAPSYTITQDTIWALDVLIEEGFTYDSS 146
             DD+ +    L  L+G+   G+R P+       I AL    ++G  + SS
Sbjct: 110 QIDDVAKGCETLARLTGKRPVGFRIPAGNGAPGLIGALK---DQGIRWSSS 157