Pairwise Alignments

Query, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  296 bits (757), Expect = 1e-84
 Identities = 183/477 (38%), Positives = 261/477 (54%), Gaps = 36/477 (7%)

Query: 1   MPGLLIVEDNEDVRRQLRWGLAKEPYDLHLAGSVDEALALQREHAPAVVTLDLGLPPDAE 60
           M  LL+V+D+ D+ + L   LA   + +  A S ++AL + +   P +V  DL +     
Sbjct: 1   MAELLLVDDDADILKLLALRLATAGHRVRTADSGEQALVMFQAQRPQLVITDLKM----- 55

Query: 61  GASEGFRGLAALLDHDPRTKVIVVTGHHDMENALRAIEGGAYDFCQKPADLEMLKVIISR 120
           G  +G      +    P   VIV+T H  +  A+ A   G + F  KP D + L   + +
Sbjct: 56  GGMDGLALFDEIQRRAPTLPVIVLTAHGTIPEAVDATRRGVFGFLTKPFDGKALLEQVEQ 115

Query: 121 AFFLHGLQGGGAMASASGMASASGGASAPDAVSGAGAGGGKPDDGWQGIVGRCPSMRAVF 180
           A  L                            S AG GGG+ +     +VG  P+M+ + 
Sbjct: 116 ALRL---------------------------ASPAGQGGGENEPWRADLVGGSPAMQELL 148

Query: 181 ETVAKVAVTGAPVLVTGESGTGKELVARAIHALGPRCTRTFVAINCGAIPDNLLEAEFFG 240
           E    VA + A V + G SGTGKEL+ARAIH   PR  + FVAINC AIP+NLLE+E FG
Sbjct: 149 ERARLVAASDASVFIAGASGTGKELLARAIHLASPRADKPFVAINCAAIPENLLESELFG 208

Query: 241 YEKGAFTGATQRVQGKVEYADGGTLFLDEIGELPANLQVKLLRFLQEKVIQRVGGRKDIA 300
           + KGAFTGAT   +G    ADGGT+FLDEIG++P +LQ KLLR LQE+ ++ VG  + + 
Sbjct: 209 HRKGAFTGATYNHKGLFLEADGGTVFLDEIGDMPLSLQAKLLRVLQERQVRPVGATQAVP 268

Query: 301 VDARIVAATNRDIQTEIASGRFREDLYYRIGVVPVALPPLRARGDDILLLARHFLESSAG 360
           VD R+V+AT+RD+   + SG+FREDLYYR+ VV +ALP L  R +DI LLA HFL+ +A 
Sbjct: 269 VDVRVVSATHRDLDELLKSGQFREDLYYRLNVVSLALPLLAERREDIPLLANHFLQRTAS 328

Query: 361 EGTGNIVGFSPAAEQAMLRYAWPGNVRELENKVRRAVIFAS-GRRIMPDDLGFDETPAKA 419
                +  F+P A +A++   WPGNVR+L+N V +AV  +     ++P  L      A  
Sbjct: 329 RYGKPVTAFAPDAMEALVTAPWPGNVRQLQNVVEQAVALSPVSGGLVPAAL---IQGALR 385

Query: 420 AAPRPEGSLREARNALERDMVLSALDKCGGNIVQASLAIGVSRPTFYDLLRKHGIEA 476
           +      SL EA+   ERD ++  L    G++ QA+     +R  FY LL +H ++A
Sbjct: 386 SGDSAFTSLDEAKKVFERDYLVRLLRLTEGSVTQAARLAQRNRTEFYKLLERHQLDA 442