Pairwise Alignments

Query, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 464 a.a., sigma54 specific transcriptional regulator, Fis family from Paraburkholderia bryophila 376MFSha3.1

 Score =  290 bits (743), Expect = 5e-83
 Identities = 161/321 (50%), Positives = 208/321 (64%), Gaps = 11/321 (3%)

Query: 160 GKP--DDGWQG----IVGRCPSMRAVFETVAKVAVTGAPVLVTGESGTGKELVARAIHAL 213
           G+P  +D  QG    +VG C +M A+F ++ KVA+T APV ++GESGTGKEL A AIH  
Sbjct: 127 GEPASNDASQGAEGEMVGSCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHER 186

Query: 214 GPRCTRTFVAINCGAIPDNLLEAEFFGYEKGAFTGATQRVQGKVEYADGGTLFLDEIGEL 273
             R    FV INCGAIP +LL++E FGYE+GAFTGA QR  G+VE A+GGTLFLDEIG+L
Sbjct: 187 SARRNAPFVPINCGAIPPHLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDL 246

Query: 274 PANLQVKLLRFLQEKVIQRVGGRKDIAVDARIVAATNRDIQTEIASGRFREDLYYRIGVV 333
           P   Q  LLRFLQE+ ++R+GG   I VD RI++AT+ D+   +  GRFR DLY+R+ V+
Sbjct: 247 PLESQASLLRFLQERKVERLGGHSAIDVDVRIISATHVDMTAAMIEGRFRSDLYHRLCVL 306

Query: 334 PVALPPLRARGDDILLLARHFLESSAGEGTGNIVGFSPAAEQAMLRYAWPGNVRELENKV 393
            +  PPLRARG DI LLARH LE    + +  + GF+P A  A+  Y WPGNVREL N+V
Sbjct: 307 QIDEPPLRARGKDIELLARHMLERFKKDASRRLRGFAPDAIAALHNYGWPGNVRELINRV 366

Query: 394 RRAVIFASGRRIMPDDLGFDETPAKAAAPRPEGSLREARNALERDMVLSALDKCGGNIVQ 453
           RRA++ + GR I   DL   E            SL +AR A ER  +  AL +  G +  
Sbjct: 367 RRAIVMSEGRAITARDLELAEYVEIVPV-----SLAQAREAAERQAIELALLRHRGRLGD 421

Query: 454 ASLAIGVSRPTFYDLLRKHGI 474
           A+  +G+SR T Y LL  HG+
Sbjct: 422 AAQELGISRVTLYRLLCSHGM 442