Pairwise Alignments

Query, 363 a.a., response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 380 a.a., Response regulator containing a CheY-like receiver domain and an HD-GYP domain from Pseudomonas stutzeri RCH2

 Score =  213 bits (543), Expect = 5e-60
 Identities = 130/363 (35%), Positives = 206/363 (56%), Gaps = 23/363 (6%)

Query: 2   SILIIDDEPGLRRSLAAHFEDLDLDTLEA-CNGLEGLEVLREHADSIEAVIVDLNMQVMD 60
           ++++IDD     R L +    + +  + A  +   GL  L+++    + +++D++M   +
Sbjct: 10  TVVVIDDITASLRLLESSVRAIGVQRIMAFSDSAAGLAWLQQN--DWDLLLLDVDMPAPN 67

Query: 61  GASFIGHATQEAPEMPIIVLSGVGVIEDAIAAMRRGAWDFITKPLHSFEMLDHTLNRVFE 120
           G   +   +       ++++S +   E   ++++ GA DFI+KPL   E+L    N++ +
Sbjct: 68  GFDILRSLSGREHNRMVVMVSALSDRESRCSSLKLGANDFISKPLDLPELLLRVRNQL-Q 126

Query: 121 RARLLRENRMHRENLECLVRQRTEELEETRRQVMQRLSRAAEYKDNETGRHVIRVGQISR 180
            +   ++ ++ RE LE  V +RTE+L  + + V+  LSRAA+YKD+ETG+H+IR+G+ + 
Sbjct: 127 LSWASKQLKIERETLERKVCERTEQLNASYQSVICSLSRAAQYKDDETGQHIIRIGESAA 186

Query: 181 LLGAAMGLGTQQCDLLGECAPLHDVGKIGIPDEVLLKPGRLDDDELVIMRRHCLYGCEIL 240
           L+ AA+G   +  + +   AP+HDVGKIGIPD +LLKPG L D E  IM+RH   G  I 
Sbjct: 187 LIAAALGQPAEWVERIRLAAPMHDVGKIGIPDHILLKPGTLTDLERKIMQRHTQIGHAI- 245

Query: 241 GPLDDREAAHRICSDVPLLRDQQPFDELALARILALCHHERWDGGGYPFGLSGEDIPVEA 300
                             LRD +    L +A  +AL HHERWDG GYP GL GE+IP+ A
Sbjct: 246 ------------------LRDGEESPLLEMAAEIALYHHERWDGTGYPHGLKGEEIPLAA 287

Query: 301 RIVSVVDVYDALCSDRPYKTAMPPDEAAILIRDGAGTQFDPAVVDAFLCHRTEIDAIRDR 360
           R+V++ DVYDAL S RPYK +   + A   I + AG  FDPA+VD       +I+ ++D 
Sbjct: 288 RVVALCDVYDALRSPRPYKESWSKERAQAYICEQAGLYFDPALVDVLNGMFQQIEDMQDS 347

Query: 361 WRD 363
             D
Sbjct: 348 LAD 350