Pairwise Alignments

Query, 271 a.a., type III secretion lipoprotein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  369 bits (948), Expect = e-107
 Identities = 188/256 (73%), Positives = 215/256 (83%)

Query: 15  RNVALAALLLVLLTGCKAELYKGLNEEQANTMLATLLKRGIEVDKQSEGKNGYTLSVERR 74
           RN ALA  LL+LLTGCKAELYKGLNEEQANTMLATLL+ G+  +K + GK GY LSVER 
Sbjct: 16  RNAALAVFLLMLLTGCKAELYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVERD 75

Query: 75  QVVQALEVLRENSLPREQYQSLGKVFSGDGMIASPSEEKARLSYAISQELADTFSRIDGV 134
           Q+V+ALE+LRENSLPREQYQ+LGKVFSGDGMIASPSEEKARL+YAISQEL+DTFSRIDGV
Sbjct: 76  QIVRALEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDGV 135

Query: 135 LTARAHVVLASSDVGTDTRTPASAAVFLRHTEDSPVVNLIPKIREMTAKAVPGLDYEKVS 194
           LTAR HVVLASS+  ++TR PASAAVFLRH  +SPVVNLIPKIRE+ AKAVPGLDYE+VS
Sbjct: 136 LTARVHVVLASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGLDYERVS 195

Query: 195 VMLVPVRESVTVPLRDAPTLLGIPLPSDSGPSYLLAGAAIALLCALLALALMGVRAGLAT 254
           VMLVPVRE+VTVP++   TL G+PLPS+SGPSYLL  A + LL AL  LA  G R GL  
Sbjct: 196 VMLVPVRETVTVPMQQGATLFGMPLPSESGPSYLLVAAGVTLLAALAGLAFAGARTGLIA 255

Query: 255 LEARKNAAADAKQHGG 270
             AR++A+ DA+   G
Sbjct: 256 FGARRSASGDARAARG 271