Pairwise Alignments

Query, 216 a.a., type III secretion system protein, YscR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 277 a.a., flagellar biosynthesis protein FliP from Burkholderia phytofirmans PsJN

 Score =  139 bits (350), Expect = 5e-38
 Identities = 78/204 (38%), Positives = 119/204 (58%), Gaps = 9/204 (4%)

Query: 13  MALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAIILSIFIMAPVASG 72
           + +L   P  L+M+TS+ +I++V SL+R ALG    PP  V+ GLA+ L++F+M+PV   
Sbjct: 81  LTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTSTTPPNQVLVGLALFLTLFVMSPVLDK 140

Query: 73  TL-DLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMSTAKRIWPADQH 131
              D  +    G  P    +    ++   P + F+ R   +  + +F     RI  A   
Sbjct: 141 AYTDGYKPFSDGTIPMETAV----NRGLAPFKTFMLRQTRESDLALFA----RISHAAPM 192

Query: 132 ASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMGMMMVSPMTISL 191
                  L +L+PSF  SEL   FQIGF +++PF+ ID+V++++L++MGMMMVSP TISL
Sbjct: 193 QGPEDVPLSLLVPSFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATISL 252

Query: 192 PFKLLLFVTLDGWLKVSQGLLLSY 215
           PFKL+LFV +DGW  +   L  S+
Sbjct: 253 PFKLMLFVLVDGWQLLLGSLAQSF 276