Pairwise Alignments

Query, 465 a.a., sigma-54 dependent DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 468 a.a., sigma-54 dependent transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  256 bits (654), Expect = 1e-72
 Identities = 162/465 (34%), Positives = 249/465 (53%), Gaps = 26/465 (5%)

Query: 1   MARILVVDDESLVRILVADTAGGMGHEVLAAASLTEAEEKAAK-GIDVVFLDVLLPDGNG 59
           M  IL+V+D++  R  + +  G  G     A SL +A  + ++   D V +D++LPDGNG
Sbjct: 1   MPHILIVEDDANARAALGELVGAEGFTTALAGSLRDARIQMSRHSPDAVLIDLVLPDGNG 60

Query: 60  LENVARFTRLPGTPEVIVITGHGSADGAETALRHGVWDYVQKPLKVQEVMLSLSRA---- 115
           ++ +       GT E+IV+TGH S + A  ALR G  DY+ KP+  Q +   L+R     
Sbjct: 61  MDLMEDIAPHSGT-EIIVMTGHASVETAVEALRMGAADYLVKPVNFQRLKSVLARIPRPG 119

Query: 116 -LAYRAGRNSATGRRPLRRDAIVGDSPALREALDLVEEAAASTVNVLITGETGTGKELFA 174
            L    G      RR      ++G+S A++   D V   A +   VL+ GE+GTGKEL A
Sbjct: 120 DLKAEIGNLRGELRRLGLFGQMLGNSTAMQTLYDQVSRVAPTEATVLLIGESGTGKELAA 179

Query: 175 RAVHANSARCESPLVTLDCASLTENLVESQLFGHVRGAFTGAERNSEGLLRQAHGGTLFL 234
           + +H  S R + P + ++C +++ NL+ES++FGH RG+FTGA+R  +G   +A+GGTLFL
Sbjct: 180 QTIHDLSLRRKQPFLPVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFL 239

Query: 235 DEAGDLPLAMQGSFLRALELRRFRPVGSAHEVSSDFRLVAATNKNLHEMTRLDLFRSDLL 294
           DE  ++P+ +Q   LR LE   F  VG+  E+ SD R++AATN++  E       R+DL 
Sbjct: 240 DEITEMPIELQVKLLRVLETGVFMRVGTNREIDSDVRVIAATNRDPEEAVADGKLRADLY 299

Query: 295 YRLRGLTITLPPLRDRTADILPLCEHVIEGYCAQHGAPMKQMAGDFMETVERYAWPGNIR 354
           +RL    + LPPLR+R  D+  L +H ++   AQ     K      MET+  Y WPGN+R
Sbjct: 300 HRLNVFPLQLPPLRERGKDVELLAQHFLDQLNAQSNT-KKAFLPPAMETLRSYHWPGNVR 358

Query: 355 ELRHAVERACTAAHDDSTLYARQLPVEVRVTVARATIPCASEVDHCMPAAEGHDGTPMTL 414
           ELR+ V+RA   + DD+ +    +P++V  T   +       V           GT +  
Sbjct: 359 ELRNYVQRAYILS-DDAGIDTANVPLQVSSTQTTSGSTLTISV-----------GTSL-- 404

Query: 415 RDYKACAERAYVTRLLDRHGADVRAAASEAGISRGHLYELVRKHG 459
               A A++  +   L++ G   + AA   GIS   LY  + ++G
Sbjct: 405 ----ASADKKLILATLEQCGGVKKRAAELLGISLKTLYNRLEEYG 445