Pairwise Alignments

Query, 479 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 733 a.a., Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (661), Expect = 3e-73
 Identities = 151/304 (49%), Positives = 193/304 (63%), Gaps = 7/304 (2%)

Query: 116 RLVTQKLHESALVRSELDYLRDRLIQGRSGGDE-GIVLDTRSPRMREVYDKIRLVAATRS 174
           RL  Q   E+  +  E  YL + + +    GD  GI     SP +R V +++ LVA + S
Sbjct: 355 RLKDQLSRENKQLAKERYYLEEEIRRTEDFGDIIGI-----SPAIRGVLEQVELVADSDS 409

Query: 175 TVLLTGETGTGKSLIARLIHSHSNRHGKRFISVHCGAIPEALVESELFGHEKGAFTGAIR 234
           TVL+ GETGTGK LIAR IH  S R  +  I V+C AIP AL+ES+LFGHEKGAFTGAI 
Sbjct: 410 TVLILGETGTGKELIARAIHMLSQRKKRTMIKVNCAAIPSALLESDLFGHEKGAFTGAIA 469

Query: 235 KKPGRFEIAEGGTIFLDEIGTIGPSVQIKLLNVLQDRCFQRVGGETVIRPDVRVVAATNE 294
           +K GRFE+A+ GT+FLDE+G I   +Q KLL  LQ+R  +RVGG   I  DVR++AATN 
Sbjct: 470 QKSGRFELADRGTLFLDEVGDIPIDLQPKLLRALQEREIERVGGHQPIPVDVRMIAATNR 529

Query: 295 DLSTLCAQGRFRRDLYYRLNVFPIDIPPLRERKEDILQLAEAFVRRCNPQRSRDIRAIHP 354
           DL+ +  +  FR DLYYRLNVFPI IPPLRER+EDI  +A+ F+R+   + +R I A   
Sbjct: 530 DLTGMVEKRLFRGDLYYRLNVFPILIPPLRERREDIPLMADYFMRKTARKMNRAIEAFSA 589

Query: 355 DVIDAFMRYDWPGNVRELENIIERACILEGGEVLSPEAFPAEFRGLPHAVRNRALDISLP 414
           + +D  +   WPGNVREL+N+IERA IL  G VL   A        P A    + D  +P
Sbjct: 590 ETMDMLLNLPWPGNVRELQNVIERAVILTKGPVLHLPATELRHHLAPSAAL-PSEDAVIP 648

Query: 415 LEAA 418
           L AA
Sbjct: 649 LRAA 652