Pairwise Alignments

Query, 479 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  268 bits (686), Expect = 2e-76
 Identities = 164/405 (40%), Positives = 229/405 (56%), Gaps = 25/405 (6%)

Query: 74  RQQHPSVDLIVLARADAIRQAVDAVRAGAGNYLTYPLHPEEVRLVTQKLHESALVRSELD 133
           +++ P++ +IVL     I +AVDA R G   +LT P   +            AL+     
Sbjct: 68  QRRAPTLPVIVLTAHGTIPEAVDATRRGVFGFLTKPFDGK------------ALLEQVEQ 115

Query: 134 YLRDRLIQGRSGGDEG---IVLDTRSPRMREVYDKIRLVAATRSTVLLTGETGTGKSLIA 190
            LR     G+ GG+       L   SP M+E+ ++ RLVAA+ ++V + G +GTGK L+A
Sbjct: 116 ALRLASPAGQGGGENEPWRADLVGGSPAMQELLERARLVAASDASVFIAGASGTGKELLA 175

Query: 191 RLIHSHSNRHGKRFISVHCGAIPEALVESELFGHEKGAFTGAIRKKPGRFEIAEGGTIFL 250
           R IH  S R  K F++++C AIPE L+ESELFGH KGAFTGA     G F  A+GGT+FL
Sbjct: 176 RAIHLASPRADKPFVAINCAAIPENLLESELFGHRKGAFTGATYNHKGLFLEADGGTVFL 235

Query: 251 DEIGTIGPSVQIKLLNVLQDRCFQRVGGETVIRPDVRVVAATNEDLSTLCAQGRFRRDLY 310
           DEIG +  S+Q KLL VLQ+R  + VG    +  DVRVV+AT+ DL  L   G+FR DLY
Sbjct: 236 DEIGDMPLSLQAKLLRVLQERQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLY 295

Query: 311 YRLNVFPIDIPPLRERKEDILQLAEAFVRRCNPQRSRDIRAIHPDVIDAFMRYDWPGNVR 370
           YRLNV  + +P L ER+EDI  LA  F++R   +  + + A  PD ++A +   WPGNVR
Sbjct: 296 YRLNVVSLALPLLAERREDIPLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVR 355

Query: 371 ELENIIERACILEGGEVLSPEAFPAEFRGLPHAVRNRALDISLPLEAARRHALDSFEREY 430
           +L+N++E+A  L           P     +P A+   AL        +   A   FER+Y
Sbjct: 356 QLQNVVEQAVALS----------PVSGGLVPAALIQGALRSGDSAFTSLDEAKKVFERDY 405

Query: 431 LERALATSGGSIKGAAAIAGVTTRQIHKLMTRHSLKKEDFKPGSG 475
           L R L  + GS+  AA +A     + +KL+ RH L  + FKPG+G
Sbjct: 406 LVRLLRLTEGSVTQAARLAQRNRTEFYKLLERHQLDAKQFKPGAG 450